MTR_2g014200 (Medicago truncatula)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 MTR_2g014200 T322730_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.892 0.693
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.888 0.707
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES63868 SBP 64 138

Links

Other SBP family TFs
Other Medicago truncatula TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I 0.965
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.964
Ca_00320 Cicer arietinum Ca_00320 I 0.963
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I 0.960
30190.m011329 Ricinus communis 30190.m011329 I 0.959
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.957
Ca_10879 Cicer arietinum Ca_10879 I 0.957
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I 0.957
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.955
30174.m008805 Ricinus communis 30174.m008805 I 0.955
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.955
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.954
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.953
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.953
Si032170m.g Setaria italica Si032170m.g I 0.953
TCM_005620 Theobroma cacao TCM_005620 I 0.953
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.953
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.953
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.953
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I 0.950
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I 0.949
TCM_008150 Theobroma cacao TCM_008150 I 0.949
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.949
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I 0.949
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.948
Si010262m.g Setaria italica Si010262m.g I 0.948
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I 0.948
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I 0.948
Cla009788 Citrullus lanatus Cla009788 I 0.946
GLYMA03G27195 Glycine max GLYMA03G27195 I 0.944
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I 0.944
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.942
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I 0.942
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I 0.942
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.941
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I 0.941
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.940
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.940
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.939
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I 0.939
F775_02791 Aegilops tauschii F775_02791 I 0.938
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.938
MTR_4g088555 Medicago truncatula MTR_4g088555 I 0.938
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.938
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.938
PK26639.1 Cannabis sativa PK26639.1 I 0.938
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.935
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I 0.934
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.934
SapurV1A.0032s0360 Salix purpurea SapurV1A.0032s0360 I 0.934
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.932
GLYMA07G14641 Glycine max GLYMA07G14641 I 0.932
OBART07G15570 Oryza barthii OBART07G15570 I 0.932
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.932
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.932
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.932
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.932
Cla021411 Citrullus lanatus Cla021411 I 0.932
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.931
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I 0.931
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I 0.930
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.929
Cucsa.259800 Cucumis sativus Cucsa.259800 I 0.929
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.928
POPTR_0007s01030 Populus trichocarpa POPTR_0007s01030 I 0.927
mgf025134m Mimulus guttatus mgf025134m I 0.927
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.926
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.926
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.925
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.925
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.925
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.924
Pm014154 Prunus mume Pm014154 I 0.924
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.924
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.924
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.923
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.923
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.923
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.923
OB04G27960 Oryza brachyantha OB04G27960 I 0.922
mgf011616m Mimulus guttatus mgf011616m I 0.922
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.920
OBART04G20940 Oryza barthii OBART04G20940 I 0.920
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.920
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.920
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.920
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.920
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.920
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.920
SPL7 Oryza sativa OS04G0551500 I 0.920
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I 0.920
Pm010075 Prunus mume Pm010075 I 0.920
MDP0000589558 Malus domestica MDP0000589558 I 0.920
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I 0.920
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I 0.920
Ca_24655 Cicer arietinum Ca_24655 I 0.918
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.918
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.918
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.917
Pm017778 Prunus mume Pm017778 I 0.917
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.916
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.916
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I 0.915
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I 0.915
SapurV1A.0382s0120 Salix purpurea SapurV1A.0382s0120 I 0.914
Sb06g024630 Sorghum bicolor Sb06g024630 I 0.913
Bra038324 Brassica rapa Bra038324 I 0.912
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.911
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.911
Bo2g062840 Brassica oleracea Bo2g062840 I 0.910
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.910
VIT_04s0210g00170 Vitis vinifera VIT_04s0210g00170 N 0.910
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I 0.910
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I 0.908
Cla017596 Citrullus lanatus Cla017596 I 0.908
Cucsa.192470 Cucumis sativus Cucsa.192470 I 0.908
MDP0000262141 Malus domestica MDP0000262141 I 0.907
Cucsa.272530 Cucumis sativus Cucsa.272530 I 0.906
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.906
Lus10005548.g Linum usitatissimum Lus10005548.g I 0.906
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.905
Pm030597 Prunus mume Pm030597 I 0.905
Cagra.1472s0017 Capsella grandiflora Cagra.1472s0017 I 0.904
Carubv10010422m.g Capsella rubella Carubv10010422m.g I 0.904
Lus10009984.g Linum usitatissimum Lus10009984.g I 0.904
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.903
Lus10018610.g Linum usitatissimum Lus10018610.g I 0.903
Lus10039846.g Linum usitatissimum Lus10039846.g I 0.903
MDP0000156994 Malus domestica MDP0000156994 I 0.903
MDP0000861601 Malus domestica MDP0000861601 I 0.903
SPL6 Arabidopsis thaliana AT1G69170 I 0.900
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.900
MDP0000171877 Malus domestica MDP0000171877 I 0.900
MDP0000246046 Malus domestica MDP0000246046 I 0.900
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.899
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.896
Bra021880 Brassica rapa Bra021880 I 0.895
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.895
Traes_2AS_C2A4AFE6F Triticum aestivum Traes_2AS_C2A4AFE6F I 0.895
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.895
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.894
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.894
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.894
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.894
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.894
gene29149-v1.0-hybrid Fragaria vesca gene29149-v1.0-hybrid I 0.894
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.894
TCM_011483 Theobroma cacao TCM_011483 I 0.893
mgf000195m Mimulus guttatus mgf000195m I 0.893
Eucgr.K01046 Eucalyptus grandis Eucgr.K01046 I 0.893
OB08G27190 Oryza brachyantha OB08G27190 I 0.892
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.892
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.892
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.892
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.892
Ca_03548 Cicer arietinum Ca_03548 I 0.892
30076.m004574 Ricinus communis 30076.m004574 I 0.892
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.892
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.892
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.892
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.892
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.892
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.892
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.892
PK06791.1 Cannabis sativa PK06791.1 D 0.892
Bo4g005730 Brassica oleracea Bo4g005730 I 0.891
Bra041037 Brassica rapa Bra041037 I 0.891
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.891
TCM_004922 Theobroma cacao TCM_004922 I 0.891
29889.m003388 Ricinus communis 29889.m003388 I 0.891
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.891
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.891
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.891
gene00196-v1.0-hybrid Fragaria vesca gene00196-v1.0-hybrid I 0.891
GRMZM2G138421 Zea mays GRMZM2G138421 I 0.890
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.889
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.889
TCM_021482 Theobroma cacao TCM_021482 I 0.889
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.889
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.889
MDP0000180408 Malus domestica MDP0000180408 I 0.889
SapurV1A.0176s0510 Salix purpurea SapurV1A.0176s0510 I 0.889
PK03565.1 Cannabis sativa PK03565.1 I 0.889
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.888
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.888
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.888
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.888
POPTR_0008s09810 Populus trichocarpa POPTR_0008s09810 I 0.887
Si013151m.g Setaria italica Si013151m.g I 0.887
28211.m000132 Ricinus communis 28211.m000132 I 0.887
mgf009459m Mimulus guttatus mgf009459m I 0.887
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.887
Solyc02g077920.2 Solanum lycopersicum Solyc02g077920.2 I 0.886
TCM_014330 Theobroma cacao TCM_014330 I 0.886
Pm025028 Prunus mume Pm025028 I 0.886
30138.m003942 Ricinus communis 30138.m003942 I 0.886
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.886
MDP0000919694 Malus domestica MDP0000919694 I 0.886