CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM11G13820
(
Oryza glumaepatula
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
OGLUM11G13820
T322804_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM11G13820.1
SBP
75
131
PQPVCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEFDDGKKSCRKRLDGHNRRRRKP
OGLUM11G13820.2
SBP
125
156
LKKRFHNLAEFDDGKKSCRKRLDGHNRRRRKP
OGLUM11G13820.3
SBP
125
154
AIFHNLAEFDDGKKSCRKRLDGHNRRRRKP
Links
Other
SBP
family TFs
Other
Oryza glumaepatula
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA11G13750
Oryza nivara
ONIVA11G13750
N
0.984
OMERI11G11920
Oryza meridionalis
OMERI11G11920
I
0.913
ORGLA11G0121600
Oryza glaberrima
ORGLA11G0121600
I
0.913
SPL19
Oryza sativa
OS11G0496600
I
0.913
PRUPE_ppa003644mg
Prunus persica
PRUPE_ppa003644mg
I
0.893
Pm025028
Prunus mume
Pm025028
I
0.893
Eucgr.B00631
Eucalyptus grandis
Eucgr.B00631
I
0.893
gene26117-v1.0-hybrid
Fragaria vesca
gene26117-v1.0-hybrid
I
0.893
Gorai.003G102800
Gossypium raimondii
Gorai.003G102800
I
0.893
Si001804m.g
Setaria italica
Si001804m.g
I
0.889
Pavir.Ea03909
Panicum virgatum
Pavir.Ea03909
I
0.889
Pavir.J02262
Panicum virgatum
Pavir.J02262
I
0.889
TCM_011483
Theobroma cacao
TCM_011483
I
0.886