OMERI06G13610 (Oryza meridionalis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OMERI06G13610 T322826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.916 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI06G13610.1 SBP 117 191

Links

Other SBP family TFs
Other Oryza meridionalis TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.984
SPL16 Oryza sativa OS08G0531600 I 0.984
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.983
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.983
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.983
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.983
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.981
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.980
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.977
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.976
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.974
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.974
Si013747m.g Setaria italica Si013747m.g N 0.971
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.971
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.971
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.970
OBART09G15750 Oryza barthii OBART09G15750 I 0.970
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.970
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.970
SPL18 Oryza sativa OS09G0507100 I 0.970
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.965
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.963
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.962
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.960
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.959
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.956
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.954
Si026656m.g Setaria italica Si026656m.g I 0.952
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.952
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.951
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.951
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.950
mgf003797m Mimulus guttatus mgf003797m I 0.950
mgf010913m Mimulus guttatus mgf010913m I 0.950
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.949
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.948
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.948
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.948
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.948
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.948
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.948
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.948
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.947
SPL19 Oryza sativa OS11G0496600 I 0.947
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.946
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.942
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.942
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.941
OS01G0922600 Oryza sativa OS01G0922600 I 0.940
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.939
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.938
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.938
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.938
PK19500.1 Cannabis sativa PK19500.1 I 0.935
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.934
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.934
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.934
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.934
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.934
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.934
TCM_008671 Theobroma cacao TCM_008671 I 0.933
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.933
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.932
OBART01G42150 Oryza barthii OBART01G42150 I 0.932
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.930
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.929
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.928
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.927
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.927
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.927
TCM_011483 Theobroma cacao TCM_011483 I 0.926
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.925
29929.m004627 Ricinus communis 29929.m004627 I 0.925
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.925
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.925
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.925
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.925
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.925
Si001804m.g Setaria italica Si001804m.g I 0.924
TCM_014668 Theobroma cacao TCM_014668 I 0.924
Pm025028 Prunus mume Pm025028 I 0.924
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.924
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.924
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.924
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.924
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.924
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.923
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.923
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.923
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.923
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.922
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.922
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.922
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.921
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.921
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.921
Ca_05711 Cicer arietinum Ca_05711 I 0.921
Cla002666 Citrullus lanatus Cla002666 I 0.921
Pm024528 Prunus mume Pm024528 I 0.921
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.921
Bo9g097630 Brassica oleracea Bo9g097630 I 0.919
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.919
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.919
PK02140.1 Cannabis sativa PK02140.1 I 0.919
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.918
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.917
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.917
SPL13A Arabidopsis thaliana AT5G50570 I 0.916
SPL13A Arabidopsis thaliana AT5G50670 D 0.916
Bo3g024180 Brassica oleracea Bo3g024180 I 0.916
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.916
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.916
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.915
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.915
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.915
Bra022766 Brassica rapa Bra022766 I 0.914
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.914
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.914
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.914
Ca_01426 Cicer arietinum Ca_01426 I 0.914
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.914
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.914
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.913
Cla004156 Citrullus lanatus Cla004156 I 0.913
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.913
30147.m014478 Ricinus communis 30147.m014478 I 0.908
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.908
Cla019579 Citrullus lanatus Cla019579 I 0.907
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.906
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.906
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.903
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.901
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.900
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.900
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.900
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.899
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.897
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.897
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.897
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.897
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.897
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.897
Ca_19449 Cicer arietinum Ca_19449 I 0.897
Cla001541 Citrullus lanatus Cla001541 I 0.897
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.897
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.897
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.897
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.896
MDP0000119458 Malus domestica MDP0000119458 I 0.896
MDP0000146640 Malus domestica MDP0000146640 I 0.896
MDP0000193702 Malus domestica MDP0000193702 I 0.896
MDP0000778465 Malus domestica MDP0000778465 I 0.896
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.894
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.894
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.894
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.893
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.893
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.893
TCM_014330 Theobroma cacao TCM_014330 I 0.893
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.893
Cla018827 Citrullus lanatus Cla018827 I 0.893
Cla019331 Citrullus lanatus Cla019331 I 0.893
30174.m009082 Ricinus communis 30174.m009082 I 0.893
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.893
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.893
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.891
PK14243.1 Cannabis sativa PK14243.1 N 0.891
30138.m003942 Ricinus communis 30138.m003942 I 0.889
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.887
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.886