OPUNC02G05050 (Oryza punctata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OPUNC02G05050 T322856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.909 0.773
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.897 0.760
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.895 0.760
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC02G05050.1 SBP 214 288

Links

Other SBP family TFs
Other Oryza punctata TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL8 Arabidopsis thaliana AT1G02065 D 0.909
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.895
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.897
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.926
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.979
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.924
SPL10 Oryza indica BGIOSGA023408 I 0.980
Bo5g001290 Brassica oleracea Bo5g001290 I 0.909
Bo8g118210 Brassica oleracea Bo8g118210 I 0.909
Bra032662 Brassica rapa Bra032662 I 0.909
Bra033221 Brassica rapa Bra033221 I 0.909
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.975
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.982
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.924
F775_00761 Aegilops tauschii F775_00761 I 0.949
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.909
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.933
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.911
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.887
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.911
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.887
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.924
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.927
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.979
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.982
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.973
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.937
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.913
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.945
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.953
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.907
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.921
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.902
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.965
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.984
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.924
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.980
MLOC_326 Hordeum vulgare MLOC_326 I 0.980
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.980
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.924
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.960
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.908
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.887
OB02G15090 Oryza brachyantha OB02G15090 I 0.984
OB04G34990 Oryza brachyantha OB04G34990 I 0.924
OB06G31100 Oryza brachyantha OB06G31100 I 0.980
OBART04G27990 Oryza barthii OBART04G27990 I 0.924
OBART06G23500 Oryza barthii OBART06G23500 I 0.970
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.924
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.980
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.924
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.979
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.924
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.980
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.980
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.924
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.924
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.980
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.979
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.924
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.980
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.924
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.980
SPL5 Oryza sativa OS02G0177300 I 0.979
SPL8 Oryza sativa OS04G0656500 I 0.924
SPL10 Oryza sativa OS06G0659100 I 0.980
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.911
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.911
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.912
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.886
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.911
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.911
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.891
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.982
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.924
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.980
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.932
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.925
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.900
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.900
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.925
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.929
Si006559m.g Setaria italica Si006559m.g I 0.980
Si017338m.g Setaria italica Si017338m.g I 0.973
Si022315m.g Setaria italica Si022315m.g I 0.924
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.911
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.896
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.911
TCM_005622 Theobroma cacao TCM_005622 I 0.911
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.980
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.963
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.924
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.904
Ca_16243 Cicer arietinum Ca_16243 I 0.887
Ca_18942 Cicer arietinum Ca_18942 I 0.911
Cla006776 Citrullus lanatus Cla006776 I 0.908
Cla020006 Citrullus lanatus Cla020006 I 0.915
Cla023735 Citrullus lanatus Cla023735 I 0.886
Pm011381 Prunus mume Pm011381 I 0.891
29983.m003158 Ricinus communis 29983.m003158 I 0.930
30174.m008803 Ricinus communis 30174.m008803 I 0.911
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.911
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.908
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.893
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.921
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.909
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.926
mgf016085m Mimulus guttatus mgf016085m I 0.915
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.937
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.909
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.909
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.909
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.911
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.911
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.911
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.910
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.892
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.911
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.911
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.917
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.915
MDP0000158607 Malus domestica MDP0000158607 I 0.891
MDP0000803116 Malus domestica MDP0000803116 I 0.909
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.911
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.973
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.980
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.980
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.924
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.924
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.904
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.911
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.886
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.909
PK25779.1 Cannabis sativa PK25779.1 I 0.911
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.901
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.887
F775_20508 Aegilops tauschii F775_20508 N 0.910
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.968
Traes_7DL_2D8356B05 Triticum aestivum Traes_7DL_2D8356B05 N 0.910
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.953