ORGLA08G0230100 (Oryza glaberrima)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 ORGLA08G0230100 T322885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.909 0.733
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA08G0230100.1 SBP 121 196

Links

Other SBP family TFs
Other Oryza glaberrima TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.983
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.983
SPL16 Oryza sativa OS08G0531600 I 0.983
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.981
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.981
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.981
ONIVA08G24550 Oryza nivara ONIVA08G24550 I 0.980
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.979
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.975
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.974
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.972
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.972
Si013747m.g Setaria italica Si013747m.g N 0.969
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.969
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.969
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.968
OBART09G15750 Oryza barthii OBART09G15750 I 0.967
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.967
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.967
SPL18 Oryza sativa OS09G0507100 I 0.967
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.965
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.959
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.958
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.956
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.955
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.952
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.949
Si026656m.g Setaria italica Si026656m.g I 0.948
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.948
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.947
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.946
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.946
mgf003797m Mimulus guttatus mgf003797m I 0.945
mgf010913m Mimulus guttatus mgf010913m I 0.945
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.944
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.943
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.943
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.943
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.943
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.943
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.943
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.943
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.942
SPL19 Oryza sativa OS11G0496600 I 0.942
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.941
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.937
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.936
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.936
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.934
OS01G0922600 Oryza sativa OS01G0922600 I 0.934
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.933
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.932
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.932
PK19500.1 Cannabis sativa PK19500.1 I 0.930
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.929
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.929
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.928
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.928
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.928
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.928
TCM_008671 Theobroma cacao TCM_008671 I 0.927
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.927
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.926
OBART01G42150 Oryza barthii OBART01G42150 I 0.926
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.924
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.922
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.921
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.920
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.920
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.920
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.919
TCM_011483 Theobroma cacao TCM_011483 I 0.919
29929.m004627 Ricinus communis 29929.m004627 I 0.919
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.919
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.919
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.919
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.919
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.919
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.917
Si001804m.g Setaria italica Si001804m.g I 0.917
TCM_014668 Theobroma cacao TCM_014668 I 0.917
Pm025028 Prunus mume Pm025028 I 0.917
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.917
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.917
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.917
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.917
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.917
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.916
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.916
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.916
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.915
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.915
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.915
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.914
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.914
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.914
Ca_05711 Cicer arietinum Ca_05711 I 0.914
Cla002666 Citrullus lanatus Cla002666 I 0.914
Pm024528 Prunus mume Pm024528 I 0.914
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.914
Bo9g097630 Brassica oleracea Bo9g097630 I 0.912
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.912
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.912
PK02140.1 Cannabis sativa PK02140.1 I 0.912
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.910
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.910
SPL13A Arabidopsis thaliana AT5G50570 I 0.909
SPL13A Arabidopsis thaliana AT5G50670 D 0.909
Bo3g024180 Brassica oleracea Bo3g024180 I 0.909
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.909
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.909
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.909
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.908
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.907
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.907
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.907
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.907
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.907
Ca_01426 Cicer arietinum Ca_01426 I 0.907
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.907
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.907
Bra022766 Brassica rapa Bra022766 I 0.906
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.906
Cla004156 Citrullus lanatus Cla004156 I 0.905
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.905
30147.m014478 Ricinus communis 30147.m014478 I 0.900
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.900
Cla019579 Citrullus lanatus Cla019579 I 0.899
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.898
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.898
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.895
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.893
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.892
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.892
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.892
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.891
Cla001541 Citrullus lanatus Cla001541 I 0.889
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.889
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.888
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.888
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.888
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.888
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.888
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.888
Ca_19449 Cicer arietinum Ca_19449 I 0.888
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.888
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.888
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.887
MDP0000119458 Malus domestica MDP0000119458 I 0.887
MDP0000146640 Malus domestica MDP0000146640 I 0.887
MDP0000193702 Malus domestica MDP0000193702 I 0.887
MDP0000778465 Malus domestica MDP0000778465 I 0.887