SELMODRAFT_79699 (Selaginella moellendorffii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 SELMODRAFT_79699 T323038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.899 0.653
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.899 0.653
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.897 0.667
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.893 0.693
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.887 0.707
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.887 0.707
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.887 0.707
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.887 0.693
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ35304 SBP 9 83

Links

Other SBP family TFs
Other Selaginella moellendorffii TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_28597 Selaginella moellendorffii SELMODRAFT_28597 I 0.984
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.951
TCM_014668 Theobroma cacao TCM_014668 I 0.948
29929.m004627 Ricinus communis 29929.m004627 I 0.943
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.942
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.941
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.941
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.940
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.940
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.940
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.939
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.938
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.938
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.937
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.937
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.937
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.935
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.933
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.933
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.933
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.933
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.933
Cla002666 Citrullus lanatus Cla002666 I 0.933
Pm024528 Prunus mume Pm024528 I 0.933
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.933
PK02140.1 Cannabis sativa PK02140.1 I 0.932
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.931
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.930
Ca_05711 Cicer arietinum Ca_05711 I 0.930
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.930
Cla019579 Citrullus lanatus Cla019579 I 0.929
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.929
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.929
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.929
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.928
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.928
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.928
Ca_01426 Cicer arietinum Ca_01426 I 0.928
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.928
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.928
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.927
PK17790.1 Cannabis sativa PK17790.1 I 0.926
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.925
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.924
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.922
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.922
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.919
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.919
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.919
Bo6g031220 Brassica oleracea Bo6g031220 I 0.917
Bra039656 Brassica rapa Bra039656 I 0.917
TCM_008671 Theobroma cacao TCM_008671 I 0.917
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.917
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.917
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.917
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.914
Cla001541 Citrullus lanatus Cla001541 I 0.913
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.913
evm.TU.supercontig_36.105 Carica papaya evm.TU.supercontig_36.105 I 0.913
Thhalv10018054m.g Eutrema salsugineum Thhalv10018054m.g I 0.913
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.912
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.912
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.911
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.911
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.909
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.909
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.909
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.909
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.909
Thhalv10006656m.g Eutrema salsugineum Thhalv10006656m.g I 0.909
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.908
30170.m014245 Ricinus communis 30170.m014245 I 0.908
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.908
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.908
Ciclev10000100m.g Citrus clementina Ciclev10000100m.g I 0.908
orange1.1g001317m.g Citrus sinensis orange1.1g001317m.g I 0.908
PK25661.1 Cannabis sativa PK25661.1 I 0.908
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.907
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.907
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.907
PK19500.1 Cannabis sativa PK19500.1 I 0.906
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.905
28211.m000132 Ricinus communis 28211.m000132 I 0.905
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.905
TCM_014330 Theobroma cacao TCM_014330 I 0.904
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.904
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.904
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.903
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.903
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.903
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.903
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.903
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.903
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.903
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.903
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.903
Ca_19449 Cicer arietinum Ca_19449 I 0.903
Cla018827 Citrullus lanatus Cla018827 I 0.903
Cla019331 Citrullus lanatus Cla019331 I 0.903
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.903
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.903
Aquca_007_00971 Aquilegia coerulea Aquca_007_00971 I 0.903
MDP0000146640 Malus domestica MDP0000146640 I 0.903
MDP0000778465 Malus domestica MDP0000778465 I 0.903
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.903
SapurV1A.0072s0370 Salix purpurea SapurV1A.0072s0370 I 0.903
TCM_031595 Theobroma cacao TCM_031595 I 0.902
30174.m009082 Ricinus communis 30174.m009082 I 0.902
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.902
Bo9g097630 Brassica oleracea Bo9g097630 I 0.901
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.901
mgf009459m Mimulus guttatus mgf009459m I 0.901
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.901
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.900
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.900
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.900
30138.m003942 Ricinus communis 30138.m003942 I 0.900
SPL13A Arabidopsis thaliana AT5G50570 I 0.899
SPL13A Arabidopsis thaliana AT5G50670 D 0.899
Bo3g024180 Brassica oleracea Bo3g024180 I 0.899
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.899
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.899
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.899
Ca_03548 Cicer arietinum Ca_03548 I 0.899
30076.m004574 Ricinus communis 30076.m004574 I 0.899
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.899
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.899
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.899
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.899
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.899
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.899
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.899
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.899
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.899
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.899
PK06791.1 Cannabis sativa PK06791.1 D 0.899
TCM_004922 Theobroma cacao TCM_004922 I 0.898
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.898
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.898
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.898
SPL12 Arabidopsis thaliana AT3G60030 D 0.897
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.897
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.897
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.897
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.897
mgf001202m Mimulus guttatus mgf001202m I 0.897
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.897
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.897
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.897
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.897
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.897
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.896
Bra022766 Brassica rapa Bra022766 I 0.896
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.896
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.896
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.896
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.896
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.896
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.896
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.896
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.896
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.896
Gorai.002G112200 Gossypium raimondii Gorai.002G112200 I 0.896
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.895
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.895
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.895
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.895
Si034095m.g Setaria italica Si034095m.g I 0.895
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.895
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I 0.895
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.895
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.895
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.894
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.894
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.894
Eucgr.F01828 Eucalyptus grandis Eucgr.F01828 I 0.894
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.893
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.893
MDP0000156994 Malus domestica MDP0000156994 I 0.892
MDP0000861601 Malus domestica MDP0000861601 I 0.892
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.891
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.891
TCM_011483 Theobroma cacao TCM_011483 I 0.891
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.891
Bo6g120690 Brassica oleracea Bo6g120690 I 0.890
Bra015732 Brassica rapa Bra015732 I 0.890
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.890
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.890
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.890
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.890
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I 0.890
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.889
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.889
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.889
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.888
Cla020006 Citrullus lanatus Cla020006 I 0.888
Pm007035 Prunus mume Pm007035 I 0.888
Thhalv10018065m.g Eutrema salsugineum Thhalv10018065m.g I 0.888
SPL14 Arabidopsis thaliana AT1G20980 D 0.887
SPL14 Arabidopsis lyrata fgenesh2_kg.1__2292__AT1G20980.1 I 0.887
POPTR_0002s00440 Populus trichocarpa POPTR_0002s00440 D 0.887
POPTR_0005s28010 Populus trichocarpa POPTR_0005s28010 I 0.887
TCM_034803 Theobroma cacao TCM_034803 I 0.887
29889.m003388 Ricinus communis 29889.m003388 I 0.887
Bostr.20129s0096 Boechera stricta Bostr.20129s0096 I 0.887
Bostr.7128s0689 Boechera stricta Bostr.7128s0689 I 0.887
Carubv10008169m.g Capsella rubella Carubv10008169m.g I 0.887
Carubv10012577m.g Capsella rubella Carubv10012577m.g I 0.887
SapurV1A.0016s0070 Salix purpurea SapurV1A.0016s0070 I 0.887
SapurV1A.0554s0130 Salix purpurea SapurV1A.0554s0130 I 0.887
SPL15 Oryza indica BGIOSGA028994 I 0.886
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.886
MTR_7g110320 Medicago truncatula MTR_7g110320 I 0.886
OB08G27190 Oryza brachyantha OB08G27190 I 0.886
OBART08G20320 Oryza barthii OBART08G20320 I 0.886
OGLUM08G21580 Oryza glumaepatula OGLUM08G21580 I 0.886
OLONG_014873 Oryza longistaminata OLONG_014873 I 0.886
OMERI02G02300 Oryza meridionalis OMERI02G02300 I 0.886
ONIVA08G22940 Oryza nivara ONIVA08G22940 I 0.886
OPUNC08G18470 Oryza punctata OPUNC08G18470 I 0.886
ORGLA08G0179900 Oryza glaberrima ORGLA08G0179900 I 0.886
ORUFI08G22780 Oryza rufipogon ORUFI08G22780 I 0.886
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.886
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.886
Ca_01036 Cicer arietinum Ca_01036 I 0.886
30147.m014478 Ricinus communis 30147.m014478 I 0.886
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.886