CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.10273s0456
(
Boechera stricta
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Bostr.10273s0456
T323380_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.10273s0456.1.p
SBP
131
205
CQVYGCNMDLSSSKDYHKRHRVCETHSKTSVVIVNGLEKRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKP
Bostr.10273s0456.2.p
SBP
131
205
CQVYGCNMDLSSSKDYHKRHRVCETHSKTSVVIVNGLEKRFCQQCSRFHFLSEFDDGKRSCRRRLAGHNERRRKP
Links
Other
SBP
family TFs
Other
Boechera stricta
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_02791
Aegilops tauschii
F775_02791
I
0.899
AMTR_s00047p00197010
Amborella trichopoda
AMTR_s00047p00197010
I
0.914
Aquca_002_00889
Aquilegia coerulea
Aquca_002_00889
I
0.907
fgenesh1_pg.C_scaffold_2001253
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001253
I
0.961
SPL6
Arabidopsis thaliana
AT1G69170
I
0.956
Bo2g062840
Brassica oleracea
Bo2g062840
I
0.951
Bo6g108620
Brassica oleracea
Bo6g108620
N
0.929
Bra004363
Brassica rapa
Bra004363
N
0.930
Bra038324
Brassica rapa
Bra038324
I
0.953
PK03565.1
Cannabis sativa
PK03565.1
I
0.932
PK14243.1
Cannabis sativa
PK14243.1
N
0.897
PK17790.1
Cannabis sativa
PK17790.1
I
0.914
Cagra.0537s0003
Capsella grandiflora
Cagra.0537s0003
I
0.977
Carubv10020369m.g
Capsella rubella
Carubv10020369m.g
I
0.977
evm.TU.supercontig_2783.1
Carica papaya
evm.TU.supercontig_2783.1
I
0.929
Ca_19449
Cicer arietinum
Ca_19449
I
0.920
Ca_24655
Cicer arietinum
Ca_24655
I
0.951
Cla004156
Citrullus lanatus
Cla004156
I
0.915
Cla018827
Citrullus lanatus
Cla018827
I
0.915
Cla019331
Citrullus lanatus
Cla019331
I
0.921
Cla021411
Citrullus lanatus
Cla021411
I
0.907
Ciclev10009879m.g
Citrus clementina
Ciclev10009879m.g
I
0.886
Ciclev10019546m.g
Citrus clementina
Ciclev10019546m.g
I
0.895
Ciclev10031270m.g
Citrus clementina
Ciclev10031270m.g
I
0.945
orange1.1g008680m.g
Citrus sinensis
orange1.1g008680m.g
I
0.895
orange1.1g009653m.g
Citrus sinensis
orange1.1g009653m.g
I
0.945
orange1.1g032937m.g
Citrus sinensis
orange1.1g032937m.g
I
0.886
Cucsa.054050
Cucumis sativus
Cucsa.054050
I
0.915
Cucsa.113410
Cucumis sativus
Cucsa.113410
I
0.921
Cucsa.198630
Cucumis sativus
Cucsa.198630
I
0.920
Cucsa.259800
Cucumis sativus
Cucsa.259800
I
0.899
Eucgr.B00631
Eucalyptus grandis
Eucgr.B00631
I
0.921
Eucgr.D02505
Eucalyptus grandis
Eucgr.D02505
I
0.886
Thhalv10018638m.g
Eutrema salsugineum
Thhalv10018638m.g
I
0.977
gene01338-v1.0-hybrid
Fragaria vesca
gene01338-v1.0-hybrid
I
0.895
gene04565-v1.0-hybrid
Fragaria vesca
gene04565-v1.0-hybrid
I
0.960
gene26117-v1.0-hybrid
Fragaria vesca
gene26117-v1.0-hybrid
I
0.921
GLYMA0005S50
Glycine max
GLYMA0005S50
I
0.920
GLYMA01G08056
Glycine max
GLYMA01G08056
I
0.951
GLYMA02G13371
Glycine max
GLYMA02G13371
I
0.951
GLYMA04G32002
Glycine max
GLYMA04G32002
I
0.920
GLYMA17G08840
Glycine max
GLYMA17G08840
I
0.920
Gorai.003G102800
Gossypium raimondii
Gorai.003G102800
I
0.921
Gorai.008G107300
Gossypium raimondii
Gorai.008G107300
I
0.926
MLOC_69667
Hordeum vulgare
MLOC_69667
I
0.899
LPERR04G17030
Leersia perrieri
LPERR04G17030
I
0.889
LPERR11G11330
Leersia perrieri
LPERR11G11330
I
0.929
Lus10000643.g
Linum usitatissimum
Lus10000643.g
I
0.929
Lus10007984.g
Linum usitatissimum
Lus10007984.g
I
0.912
Lus10021141.g
Linum usitatissimum
Lus10021141.g
I
0.917
Lus10021614.g
Linum usitatissimum
Lus10021614.g
N
0.901
Lus10036812.g
Linum usitatissimum
Lus10036812.g
I
0.922
MDP0000119458
Malus domestica
MDP0000119458
I
0.942
MDP0000142582
Malus domestica
MDP0000142582
N
0.937
MDP0000146640
Malus domestica
MDP0000146640
I
0.919
MDP0000171877
Malus domestica
MDP0000171877
I
0.956
MDP0000193702
Malus domestica
MDP0000193702
I
0.942
MDP0000246046
Malus domestica
MDP0000246046
I
0.956
MDP0000589558
Malus domestica
MDP0000589558
I
0.945
MDP0000778465
Malus domestica
MDP0000778465
I
0.919
cassava39122.m1
Manihot esculenta
cassava39122.m1
I
0.913
cassava43385.valid.m1
Manihot esculenta
cassava43385.valid.m1
I
0.911
cassava7440.valid.m1
Manihot esculenta
cassava7440.valid.m1
I
0.905
MTR_2g461920
Medicago truncatula
MTR_2g461920
I
0.920
MTR_4g109770
Medicago truncatula
MTR_4g109770
I
0.920
MTR_5g046670
Medicago truncatula
MTR_5g046670
I
0.932
MTR_7g028740
Medicago truncatula
MTR_7g028740
I
0.905
OBART04G20940
Oryza barthii
OBART04G20940
I
0.898
OBART07G15570
Oryza barthii
OBART07G15570
I
0.920
OB04G27960
Oryza brachyantha
OB04G27960
I
0.898
ORGLA04G0180000
Oryza glaberrima
ORGLA04G0180000
I
0.898
ORGLA11G0121600
Oryza glaberrima
ORGLA11G0121600
I
0.889
OGLUM04G20870
Oryza glumaepatula
OGLUM04G20870
I
0.898
OGLUM07G15250
Oryza glumaepatula
OGLUM07G15250
I
0.920
BGIOSGA016888
Oryza indica
BGIOSGA016888
I
0.898
BGIOSGA024253
Oryza indica
BGIOSGA024253
I
0.920
OMERI04G17360
Oryza meridionalis
OMERI04G17360
I
0.898
OMERI07G12270
Oryza meridionalis
OMERI07G12270
I
0.920
ONIVA04G19190
Oryza nivara
ONIVA04G19190
I
0.898
ONIVA07G14170
Oryza nivara
ONIVA07G14170
I
0.920
OPUNC04G18620
Oryza punctata
OPUNC04G18620
I
0.898
OPUNC07G14360
Oryza punctata
OPUNC07G14360
N
0.936
ORUFI04G22540
Oryza rufipogon
ORUFI04G22540
I
0.898
ORUFI07G16070
Oryza rufipogon
ORUFI07G16070
I
0.920
SPL7
Oryza sativa
OS04G0551500
I
0.898
SPL19
Oryza sativa
OS11G0496600
I
0.889
Pavir.Fb01917
Panicum virgatum
Pavir.Fb01917
I
0.898
POPTR_0008s09750
Populus trichocarpa
POPTR_0008s09750
I
0.915
POPTR_0010s16400
Populus trichocarpa
POPTR_0010s16400
I
0.921
POPTR_0015s07140
Populus trichocarpa
POPTR_0015s07140
I
0.915
POPTR_0018s14680
Populus trichocarpa
POPTR_0018s14680
N
0.886
Pm025028
Prunus mume
Pm025028
I
0.915
Pm030597
Prunus mume
Pm030597
I
0.962
PRUPE_ppa003644mg
Prunus persica
PRUPE_ppa003644mg
I
0.921
PRUPE_ppa017695mg
Prunus persica
PRUPE_ppa017695mg
I
0.962
30138.m003942
Ricinus communis
30138.m003942
I
0.919
30174.m009082
Ricinus communis
30174.m009082
I
0.919
SapurV1A.0072s0340
Salix purpurea
SapurV1A.0072s0340
I
0.921
SapurV1A.0176s0470
Salix purpurea
SapurV1A.0176s0470
I
0.934
SapurV1A.0329s0040
Salix purpurea
SapurV1A.0329s0040
I
0.952
SapurV1A.0430s0160
Salix purpurea
SapurV1A.0430s0160
N
0.886
SELMODRAFT_28634
Selaginella moellendorffii
SELMODRAFT_28634
N
0.946
SELMODRAFT_28635
Selaginella moellendorffii
SELMODRAFT_28635
N
0.946
Si010262m.g
Setaria italica
Si010262m.g
I
0.895
Si013151m.g
Setaria italica
Si013151m.g
I
0.898
Si032170m.g
Setaria italica
Si032170m.g
I
0.921
Solyc02g077920.2
Solanum lycopersicum
Solyc02g077920.2
I
0.923
Solyc03g114850.2
Solanum lycopersicum
Solyc03g114850.2
I
0.912
Solyc12g038520.1
Solanum lycopersicum
Solyc12g038520.1
I
0.896
PGSC0003DMG400023260
Solanum tuberosum
PGSC0003DMG400023260
I
0.896
PGSC0003DMG400024527
Solanum tuberosum
PGSC0003DMG400024527
I
0.912
Sb07g027420
Sorghum bicolor
Sb07g027420
I
0.905
TCM_011483
Theobroma cacao
TCM_011483
I
0.915
TCM_014330
Theobroma cacao
TCM_014330
I
0.920
Traes_2AL_B45245746
Triticum aestivum
Traes_2AL_B45245746
I
0.899
Traes_2BL_69E6AB6D1
Triticum aestivum
Traes_2BL_69E6AB6D1
I
0.899
VIT_01s0011g00130
Vitis vinifera
VIT_01s0011g00130
I
0.927
SPL3
Vitis vinifera
VIT_10s0003g00050
I
0.898
SPL2
Vitis vinifera
VIT_11s0065g00170
N
0.890
VIT_14s0068g01780
Vitis vinifera
VIT_14s0068g01780
N
0.902
VIT_17s0000g05020
Vitis vinifera
VIT_17s0000g05020
I
0.921
GRMZM2G098557
Zea mays
GRMZM2G098557
I
0.905
GRMZM2G148467
Zea mays
GRMZM2G148467
I
0.889
GRMZM2G169270
Zea mays
GRMZM2G169270
I
0.905