Eucgr.D02505 (Eucalyptus grandis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Eucgr.D02505 T323453_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.897 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02505.1 SBP 126 200

Links

Other SBP family TFs
Other Eucalyptus grandis TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.976
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.975
Si010262m.g Setaria italica Si010262m.g I 0.975
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.974
TCM_005620 Theobroma cacao TCM_005620 I 0.974
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.974
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.973
Ca_10879 Cicer arietinum Ca_10879 I 0.973
30174.m008805 Ricinus communis 30174.m008805 I 0.973
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.973
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.972
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.971
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I 0.971
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.970
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.970
F775_02791 Aegilops tauschii F775_02791 I 0.968
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.968
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.968
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.968
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I 0.968
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I 0.968
GLYMA03G27195 Glycine max GLYMA03G27195 I 0.966
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.966
MTR_2g014200 Medicago truncatula MTR_2g014200 I 0.965
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I 0.963
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I 0.963
GLYMA07G14641 Glycine max GLYMA07G14641 I 0.962
Cla021411 Citrullus lanatus Cla021411 I 0.962
Sb06g024630 Sorghum bicolor Sb06g024630 I 0.960
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I 0.959
Cucsa.259800 Cucumis sativus Cucsa.259800 I 0.959
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.956
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I 0.955
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.954
Cla009788 Citrullus lanatus Cla009788 I 0.953
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.951
OB04G27960 Oryza brachyantha OB04G27960 I 0.950
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.950
Pm017778 Prunus mume Pm017778 I 0.950
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.949
OBART04G20940 Oryza barthii OBART04G20940 I 0.949
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.949
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.949
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.949
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.949
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.949
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.949
SPL7 Oryza sativa OS04G0551500 I 0.949
Si032170m.g Setaria italica Si032170m.g I 0.949
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.948
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I 0.948
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.948
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.947
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.947
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.947
30190.m011329 Ricinus communis 30190.m011329 I 0.947
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.946
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.946
mgf025134m Mimulus guttatus mgf025134m I 0.945
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I 0.945
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I 0.943
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.942
MDP0000262141 Malus domestica MDP0000262141 I 0.942
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.940
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.940
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I 0.939
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I 0.938
Bra038324 Brassica rapa Bra038324 I 0.936
SapurV1A.0032s0360 Salix purpurea SapurV1A.0032s0360 I 0.936
SapurV1A.0382s0120 Salix purpurea SapurV1A.0382s0120 I 0.936
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.935
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.935
OBART07G15570 Oryza barthii OBART07G15570 I 0.935
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.935
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.935
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.935
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.935
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.935
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.935
Bo2g062840 Brassica oleracea Bo2g062840 I 0.934
PK26639.1 Cannabis sativa PK26639.1 I 0.934
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.932
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.932
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.932
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.932
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.932
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.931
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.930
Pm030597 Prunus mume Pm030597 I 0.930
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I 0.930
Ca_00320 Cicer arietinum Ca_00320 I 0.929
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I 0.929
MTR_4g088555 Medicago truncatula MTR_4g088555 I 0.928
Ca_24655 Cicer arietinum Ca_24655 I 0.928
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.928
SPL6 Arabidopsis thaliana AT1G69170 I 0.926
MDP0000589558 Malus domestica MDP0000589558 I 0.926
Traes_2AS_C2A4AFE6F Triticum aestivum Traes_2AS_C2A4AFE6F I 0.925
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.925
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.925
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.924
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.923
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.923
MDP0000171877 Malus domestica MDP0000171877 I 0.920
MDP0000246046 Malus domestica MDP0000246046 I 0.920
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I 0.920
gene00196-v1.0-hybrid Fragaria vesca gene00196-v1.0-hybrid I 0.919
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I 0.918
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.918
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.918
TCM_011483 Theobroma cacao TCM_011483 I 0.918
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.918
Pm014154 Prunus mume Pm014154 I 0.918
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I 0.918
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.918
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.918
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.918
Pm025028 Prunus mume Pm025028 I 0.916
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.916
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.915
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.915
SPL19 Oryza sativa OS11G0496600 I 0.915
mgf011616m Mimulus guttatus mgf011616m I 0.914
VIT_04s0210g00170 Vitis vinifera VIT_04s0210g00170 N 0.913
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.910
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I 0.910
Pm010075 Prunus mume Pm010075 I 0.910
gene29149-v1.0-hybrid Fragaria vesca gene29149-v1.0-hybrid I 0.909
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.909
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.909
TCM_031595 Theobroma cacao TCM_031595 I 0.905
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.905
MDP0000156994 Malus domestica MDP0000156994 I 0.905
MDP0000861601 Malus domestica MDP0000861601 I 0.905
Cucsa.272530 Cucumis sativus Cucsa.272530 I 0.904
GRMZM2G138421 Zea mays GRMZM2G138421 I 0.903
28211.m000132 Ricinus communis 28211.m000132 I 0.903
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.903
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.903
Cagra.1472s0017 Capsella grandiflora Cagra.1472s0017 I 0.903
Carubv10010422m.g Capsella rubella Carubv10010422m.g I 0.903
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.903
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I 0.903
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I 0.903
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.902
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.902
SapurV1A.0176s0510 Salix purpurea SapurV1A.0176s0510 I 0.902
PK03565.1 Cannabis sativa PK03565.1 I 0.902
POPTR_0008s09810 Populus trichocarpa POPTR_0008s09810 I 0.901
TCM_008150 Theobroma cacao TCM_008150 I 0.901
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.900
Cla017596 Citrullus lanatus Cla017596 I 0.900
Cucsa.192470 Cucumis sativus Cucsa.192470 I 0.900
GLYMA07G19770 Glycine max GLYMA07G19770 I 0.899
GLYMA20G00900 Glycine max GLYMA20G00900 I 0.899
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.899
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.899
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.898
gw1.313.30.1 Physcomitrella patens gw1.313.30.1 I 0.898
mgf000195m Mimulus guttatus mgf000195m I 0.898
Eucgr.K01046 Eucalyptus grandis Eucgr.K01046 I 0.898
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.898
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.897
MTR_1g035010 Medicago truncatula MTR_1g035010 I 0.897
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.897
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.897
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.897
Lus10005548.g Linum usitatissimum Lus10005548.g I 0.897
LjSGA_121222.1 Lotus japonicus LjSGA_121222.1 I 0.897
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.896
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.896
Si034095m.g Setaria italica Si034095m.g I 0.896
MDP0000119458 Malus domestica MDP0000119458 I 0.896
MDP0000193702 Malus domestica MDP0000193702 I 0.896
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.896
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.896
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.895
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.895
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I 0.895
30138.m003942 Ricinus communis 30138.m003942 I 0.895
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.895
Lus10009984.g Linum usitatissimum Lus10009984.g I 0.895
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.894
F775_31139 Aegilops tauschii F775_31139 I 0.894
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.894
OB03G47050 Oryza brachyantha OB03G47050 I 0.894
OBART03G39900 Oryza barthii OBART03G39900 I 0.894
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.894
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.894
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.894
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.894
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.894
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.894
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.894
SPL6 Oryza sativa OS03G0833300 I 0.894
POPTR_0007s01030 Populus trichocarpa POPTR_0007s01030 I 0.894
TCM_014330 Theobroma cacao TCM_014330 I 0.894
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.894
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.894
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.894
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.893
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.893
Cla019331 Citrullus lanatus Cla019331 I 0.893
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.893
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.893
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.893
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.893
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.893
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.893
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.893
PK17790.1 Cannabis sativa PK17790.1 I 0.893
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.892
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.892
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.892
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.892
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.892
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.892
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.892
Si001804m.g Setaria italica Si001804m.g I 0.892
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.892
Ca_19449 Cicer arietinum Ca_19449 I 0.892
30174.m009082 Ricinus communis 30174.m009082 I 0.892
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.892
MDP0000919693 Malus domestica MDP0000919693 I 0.892
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.892
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.892
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.891
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.891
gw1.47.180.1 Physcomitrella patens gw1.47.180.1 I 0.891
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I 0.891
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.891
Lus10018610.g Linum usitatissimum Lus10018610.g I 0.891
Lus10039846.g Linum usitatissimum Lus10039846.g I 0.891
MDP0000146640 Malus domestica MDP0000146640 I 0.891
MDP0000778465 Malus domestica MDP0000778465 I 0.891
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.890
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.890
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.890
Cla018827 Citrullus lanatus Cla018827 I 0.890
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.890
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.890
LjT35D18.50.nc Lotus japonicus LjT35D18.50.nc I 0.890
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.889
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.888
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.888
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.888
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.887
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.887
OB08G27190 Oryza brachyantha OB08G27190 I 0.886
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N 0.886
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.886