MDP0000142582 (Malus domestica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 MDP0000142582 T323556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000142582 SBP 65 139

Links

Other SBP family TFs
Other Malus domestica TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.975
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I 0.968
Pm016138 Prunus mume Pm016138 I 0.968
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N 0.961
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N 0.961
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.954
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.950
MDP0000170630 Malus domestica MDP0000170630 N 0.948
30147.m014478 Ricinus communis 30147.m014478 I 0.947
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.947
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.945
Cla001541 Citrullus lanatus Cla001541 I 0.944
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.944
PK17790.1 Cannabis sativa PK17790.1 I 0.941
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N 0.937
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.936
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.936
PK14243.1 Cannabis sativa PK14243.1 N 0.936
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.935
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.935
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.935
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.934
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.932
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.932
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.932
SPL19 Oryza sativa OS11G0496600 I 0.932
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.931
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.929
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.929
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.929
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.928
Cla004156 Citrullus lanatus Cla004156 I 0.926
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.926
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.925
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.925
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.925
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.925
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.925
Ca_19449 Cicer arietinum Ca_19449 I 0.925
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.925
MDP0000146640 Malus domestica MDP0000146640 I 0.925
MDP0000778465 Malus domestica MDP0000778465 I 0.925
30138.m003942 Ricinus communis 30138.m003942 I 0.924
MDP0000119458 Malus domestica MDP0000119458 I 0.924
MDP0000193702 Malus domestica MDP0000193702 I 0.924
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.923
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.923
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.923
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I 0.923
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.922
TCM_014330 Theobroma cacao TCM_014330 I 0.922
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.922
Cla019331 Citrullus lanatus Cla019331 I 0.922
30174.m009082 Ricinus communis 30174.m009082 I 0.922
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.922
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.922
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.922
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.922
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.922
Cla018827 Citrullus lanatus Cla018827 I 0.921
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.920
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.920
Si001804m.g Setaria italica Si001804m.g I 0.919
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.919
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.919
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.918
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.916
Si026656m.g Setaria italica Si026656m.g I 0.915
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.915
Bo3g042890 Brassica oleracea Bo3g042890 I 0.914
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.914
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.913
Ca_05711 Cicer arietinum Ca_05711 I 0.913
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.913
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.912
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.912
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.912
PK02140.1 Cannabis sativa PK02140.1 I 0.912
Solyc02g077920.2 Solanum lycopersicum Solyc02g077920.2 I 0.911
TCM_014668 Theobroma cacao TCM_014668 I 0.911
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.911
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.910
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.908
Si013747m.g Setaria italica Si013747m.g N 0.908
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.908
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.908
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.908
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.908
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.907
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.907
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.907
Cla002666 Citrullus lanatus Cla002666 I 0.907
Pm024528 Prunus mume Pm024528 I 0.907
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.907
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.907
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.907
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.907
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.904
Pm025028 Prunus mume Pm025028 I 0.904
29929.m004627 Ricinus communis 29929.m004627 I 0.904
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.904
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.903
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.902
TCM_011483 Theobroma cacao TCM_011483 I 0.901
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.901
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.900
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.900
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.900
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.900
Ca_01426 Cicer arietinum Ca_01426 I 0.900
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.900
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.900
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.898
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.898
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.897
GLYMA16G05895 Glycine max GLYMA16G05895 I 0.896
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.895
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.894
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.894
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.894
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.894
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.894
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.893
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.893
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.893
SPL6 Arabidopsis thaliana AT1G69170 I 0.892
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.892
Aquca_036_00099 Aquilegia coerulea Aquca_036_00099 N 0.892
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.891
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.890
Cla019579 Citrullus lanatus Cla019579 I 0.890
Pm030597 Prunus mume Pm030597 I 0.890
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.889
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.887
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.887
TCM_008671 Theobroma cacao TCM_008671 I 0.886
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.886
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.886
MDP0000171877 Malus domestica MDP0000171877 I 0.886
MDP0000246046 Malus domestica MDP0000246046 I 0.886
MDP0000589558 Malus domestica MDP0000589558 I 0.886