SapurV1A.4644s0020 (Salix purpurea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 SapurV1A.4644s0020 T324250_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.4644s0020.1.p Sigma 70 189 259

Links

Other Sigma 70 family TFs
Other Salix purpurea TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0027s0740 Salix purpurea SapurV1A.0027s0740 N 1.000
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.915
SIGD Arabidopsis thaliana AT5G13730 N 0.817
Bo2g011520 Brassica oleracea Bo2g011520 N 0.817
Bo9g166510 Brassica oleracea Bo9g166510 N 0.817
Bra008807 Brassica rapa Bra008807 N 0.817
Bra023430 Brassica rapa Bra023430 N 0.817
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.817
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.817
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.817
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.817
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.803
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.789
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.789
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.775
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.761
29864.m001444 Ricinus communis 29864.m001444 N 0.761
AMTR_s00025p00248060 Amborella trichopoda AMTR_s00025p00248060 N 0.746
cassava43094.valid.m1 Manihot esculenta cassava43094.valid.m1 N 0.746
PDK_20s1385451g001 Phoenix dactylifera PDK_20s1385451g001 N 0.746
PK06863.1 Cannabis sativa PK06863.1 N 0.732
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.718
SIG4 Arabidopsis lyrata scaffold_601382.1 N 0.703