CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGALG00000007870
(
Gallus gallus
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
ENSGALG00000007870
T324648_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN
NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.970
0.970
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA
TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.970
0.970
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.970
0.970
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.970
0.970
Smad3
M09637_2.00
Mus musculus
BYAGMCWN
NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.970
0.970
SMAD3
M11283_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.970
0.970
SMAD3
M11284_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.970
0.970
SMAD3
M11285_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.970
0.970
SMAD9
M11274_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_01
0.713
0.713
Smad9
M11290_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_02
0.713
0.713
Smad9
M11289_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD8_03
0.713
0.713
Mad
M06446_2.00
Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC
B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648
0.703
0.703
Mad
M08427_2.00
Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS
ChIP-chip
Mathelier et al.(2014)
MA0535.1
0.703
0.703
Mad
M09692_2.00
Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM
Misc
Kulakovskiy et al.(2009)
Mad
0.703
0.703
Mad
M11293_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$MAD_Q6
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000012765
SMAD
31
131
CEKAVKSLVKKLKKTGQLDELEKAITTQNINTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMEMCEYAFNMKKDEVCVNPYHYQRVE
Links
Other
SMAD
family TFs
Other
Gallus gallus
TFs
196 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL55
Arabidopsis lyrata
fgenesh2_kg.2__370__AT1G60920.1
I
AGL56
Arabidopsis lyrata
fgenesh2_kg.2__374__AT1G60880.1
I
AGL56
Arabidopsis thaliana
AT1G60880
I
AGL55
Arabidopsis thaliana
AT1G60920
D
Bostr.10040s0123
Boechera stricta
Bostr.10040s0123
I
Bo9g043470
Brassica oleracea
Bo9g043470
I
Bo9g043530
Brassica oleracea
Bo9g043530
I
Bra027116
Brassica rapa
Bra027116
I
Bra040965
Brassica rapa
Bra040965
I
Carubv10021715m.g
Capsella rubella
Carubv10021715m.g
I
Thhalv10023813m.g
Eutrema salsugineum
Thhalv10023813m.g
I