CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SINV22770
(
Solenopsis invicta
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03165 (MH1)
IPR003619
SINV22770
T325194_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smad3
M00192_2.00
Mus musculus
NNNNNMGMCN
NGKCKNNNNN
PBM
Badis et al.(2009)
Smad3_3805
0.780
0.780
SMAD3
M03482_2.00
Homo sapiens
YGTCTAGACA
TGTCTAGACR
SELEX
Jolma et al.(2013)
SMAD3_1
0.780
0.780
SMAD3
M09380_2.00
Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B
0.780
0.780
Smad3
M09384_2.00
Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN
Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B
0.780
0.780
Smad3
M09637_2.00
Mus musculus
BYAGMCWN
NWGKCTRV
Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673
0.780
0.780
SMAD3
M11283_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_01
0.780
0.780
SMAD3
M11284_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6_02
0.780
0.780
SMAD3
M11285_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SMAD3_Q6
0.780
0.780
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SINV22770-PA
SMAD
30
70
SEKAVKSLVKKLKKSAGLEELEKAITTQSCNTKCITIPRYV
Links
Other
SMAD
family TFs
Other
Solenopsis invicta
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP23524
Atta cephalotes
ACEP23524
I
0.974
GB42212
Apis mellifera
GB42212
N
0.878
CpipJ_CPIJ018354
Culex pipiens
CpipJ_CPIJ018354
I
0.846
SMAR008230
Strigamia maritima
SMAR008230
I
0.829
PPAI005080
Phlebotomus papatasi
PPAI005080
I
0.821
ENSAPLG00000011496
Anas platyrhynchos
ENSAPLG00000011496
I
0.816
ENSGMOG00000001314
Gadus morhua
ENSGMOG00000001314
I
0.816
Brh_R001114
Buceros rhinoceros
Brh_R001114
I
0.816
Tal_R011237
Tyto alba
Tal_R011237
I
0.816
CapteG167863
Capitella teleta
CapteG167863
I
0.805
CLEC004107
Cimex lectularius
CLEC004107
I
0.805
Gfo_R000026
Geospiza fortis
Gfo_R000026
I
0.800
Tal_R000062
Tyto alba
Tal_R000062
I
0.800
ENSOARG00000018267
Ovis aries
ENSOARG00000018267
I
0.795
smad3a
Danio rerio
ENSDARG00000036096
I
0.780
ENSGALG00000007870
Gallus gallus
ENSGALG00000007870
I
0.780
ENSPFOG00000006336
Poecilia formosa
ENSPFOG00000006336
I
0.780
smad3a
Tetraodon nigroviridis
ENSTNIG00000009546
I
0.780
smad3b
Takifugu rubripes
ENSTRUG00000014802
I
0.780
smad3a
Takifugu rubripes
ENSTRUG00000016858
I
0.780
Aan_R005610
Calypte anna
Aan_R005610
I
0.780
Afo_R015053
Aptenodytes forsteri
Afo_R015053
I
0.780
AEPI002511
Anopheles epiroticus
AEPI002511
N
0.769
CGI_10017370
Crassostrea gigas
CGI_10017370
I
0.756
SMAD3
Procavia capensis
ENSPCAG00000008103
I
0.756
BGIBMGA009650
Bombyx mori
BGIBMGA009650
N
0.732
SMAD2
Microcebus murinus
ENSMICG00000007882
I
0.721
ADIR005117
Anopheles dirus
ADIR005117
I
0.718