XP_002157279.1 (Hydra magnipapillata)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 XP_002157279.1 T325457_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.775 0.775
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.775 0.775
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.775 0.775
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.775 0.775
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.775 0.775
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.775 0.775
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.775 0.775
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002157279.1 SMAD 31 132

Links

Other SMAD family TFs
Other Hydra magnipapillata TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.891
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.891
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 0.889
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 0.889
Brh_R001115 Buceros rhinoceros Brh_R001115 I 0.889
Tal_R001210 Tyto alba Tal_R001210 I 0.889
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.851
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.851
SMAR008230 Strigamia maritima SMAR008230 I 0.843
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.832
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I 0.832
ML011743a Mnemiopsis leidyi ML011743a I 0.830
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.824
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 0.821
CapteG167863 Capitella teleta CapteG167863 I 0.814
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.814
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.814
SMAD2 Sorex araneus ENSSARG00000003487 I 0.812
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.812
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.812
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.812
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 0.804
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.804
ISCW001846 Ixodes scapularis ISCW001846 I 0.804
L798_14024 Zootermopsis nevadensis L798_14024 I 0.804
Aan_R002236 Calypte anna Aan_R002236 I 0.804
AAB39329 Xenopus laevis AAB39329 I 0.804
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.802
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.794
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.794
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.794
Smad3 Mus musculus ENSMUSG00000032402 D 0.789
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.784
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.784
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.784
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.784
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.784
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.784
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.784
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.784
Aan_R005610 Calypte anna Aan_R005610 I 0.784
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.784
smad2.S Xenopus laevis XB-GENE-864923 I 0.784
smad3b Danio rerio ENSDARG00000010207 I 0.782
smad3b Oryzias latipes ENSORLG00000006803 I 0.782
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.782
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.782
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.775
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.775
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.775
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.775
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.775
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.775
smad3a Danio rerio ENSDARG00000036096 I 0.775
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.775
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.775
SMAD3 Homo sapiens ENSG00000166949 D 0.775
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.775
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.775
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.775
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.775
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.775
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.775
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.775
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.775
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.775
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.775
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.775
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.775
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.775
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.775
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.775
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.775
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.775
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.775
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.775
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.772
smad3a Oryzias latipes ENSORLG00000002207 I 0.772
LotgiG189014 Lottia gigantea LotgiG189014 I 0.772
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I 0.767
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.765
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.765
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.765
smad3 Xenopus tropicalis XB-GENE-481992 I 0.755
ENSCING00000006188 Ciona intestinalis ENSCING00000006188 I 0.752
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.745
smad3.L Xenopus laevis XB-GENE-864816 I 0.745
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I 0.735
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I 0.735
TriadG49742 Trichoplax adhaerens TriadG49742 I 0.735
BGLB001215 Biomphalaria glabrata BGLB001215 I 0.735
BGLB010651 Biomphalaria glabrata BGLB010651 I 0.735
GB42213 Apis mellifera GB42213 N 0.726
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I 0.725
TriadG50301 Trichoplax adhaerens TriadG50301 I 0.725
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.725
Sakowv30001252m.g Saccoglossus kowalevskii Sakowv30001252m.g I 0.725
CGI_10014747 Crassostrea gigas CGI_10014747 I 0.716
HelroG185435 Helobdella robusta HelroG185435 I 0.716
HelroG186716 Helobdella robusta HelroG186716 I 0.716
PHUM033930 Pediculus humanus PHUM033930 I 0.716
D918_06928 Trichuris suis D918_06928 I 0.716
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I 0.716
ENSAMXG00000010992 Astyanax mexicanus ENSAMXG00000010992 I 0.706
smad5 Danio rerio ENSDARG00000037238 I 0.706
ENSLOCG00000011514 Lepisosteus oculatus ENSLOCG00000011514 I 0.706
ENSONIG00000015791 Oreochromis niloticus ENSONIG00000015791 I 0.706
smad5 Oryzias latipes ENSORLG00000009395 I 0.706
ISCW010869 Ixodes scapularis ISCW010869 I 0.706
LotgiG104873 Lottia gigantea LotgiG104873 I 0.706
SPU_020722 Strongylocentrotus purpuratus SPU_020722 I 0.706
SPU_023107 Strongylocentrotus purpuratus SPU_023107 I 0.706
Ogr17529 Ophisaurus gracilis Ogr17529 I 0.706
XP_002160208.1 Hydra magnipapillata XP_002160208.1 I 0.706
TMUE_s0173000400 Trichuris muris TMUE_s0173000400 I 0.706
TsM_000781600 Taenia solium TsM_000781600 I 0.706
LDEC015977 Leptinotarsa decemlineata LDEC015977 I 0.700