CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig468.frz3.gene35
(
Meloidogyne hapla
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
MhA1_Contig468.frz3.gene35
T325809_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig468.frz3.gene35
SMAD
48
82
TVEDLELRPSEDCLFPYDGRNEQICINPYHYHRVD
Links
Other
SMAD
family TFs
Other
Meloidogyne hapla
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc07882
Meloidogyne incognita
Minc07882
I
0.771
maker-nMf.1.1.scaf04862-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf04862-augustus-gene-0.4
I
0.771