CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTSG_12457
(
Salpingoeca rosetta
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PTSG_12457
T326092_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTSG_12457T0
Sox
72
140
IKRPLNEFFLYKRDKTQELKRTKAQLKMNTLNAEIGHLWQNESQEVRDHYKRLAEKQKEEHKRLYPDYK
Links
Other
Sox
family TFs
Other
Salpingoeca rosetta
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184994.g56
Trametes cinnabarina
BN946_scf184994.g56
I
0.477
SCHCODRAFT_114988
Schizophyllum commune
SCHCODRAFT_114988
I
0.463
HelroG79409
Helobdella robusta
HelroG79409
N
0.446
PTRG_11789
Pyrenophora triticirepentis
PTRG_11789
I
0.443
Moror_16653
Moniliophthora roreri
Moror_16653
I
0.433
AMAG_06979
Allomyces macrogynus
AMAG_06979
I
0.420
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.419
Ecym_1257
Eremothecium cymbalariae
Ecym_1257
I
0.416
PTRG_10423
Pyrenophora triticirepentis
PTRG_10423
I
0.416