CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_15755
(
Rhizopus oryzae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
RO3G_15755
T326119_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.449
0.448
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_15754
Sox
184
250
PFKPPSAYVMFSNDTRAELKQQNKSFTDLAKIIGDRWKSIPTEEKNAYERNALKAREEYLKRVEEYQ
Links
Other
Sox
family TFs
Other
Rhizopus oryzae
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01197
Capronia coronata
A1O1_01197
I
0.442
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.442
A1O5_06047
Cladophialophora psammophila
A1O5_06047
I
0.442
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.442
AALB006415
Anopheles albimanus
AALB006415
I
0.455
AARA010616
Anopheles arabiensis
AARA010616
I
0.455
AATE016215
Anopheles atroparvus
AATE016215
I
0.455
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.421
ACUA004409
Anopheles culicifacies
ACUA004409
I
0.455
ACYPI005775
Acyrthosiphon pisum
ACYPI005775
I
0.451
ADAC003252
Anopheles darlingi
ADAC003252
I
0.455
AFAF011136
Anopheles farauti
AFAF011136
I
0.455
AGAP000281
Anopheles gambiae
AGAP000281
I
0.455
AMEC012857
Anopheles melas
AMEC012857
I
0.455
AMEM006878
Anopheles merus
AMEM006878
I
0.455
AOL_s00076g81
Arthrobotrys oligospora
AOL_s00076g81
I
0.554
ASIS016667
Anopheles sinensis
ASIS016667
I
0.455
ASTEI07799
Anopheles stephensi
ASTEI07799
I
0.455
AUEXF2481DRAFT_32739
Aureobasidium subglaciale
AUEXF2481DRAFT_32739
I
0.416
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.416
BDDG_03827
Blastomyces dermatitidis
BDDG_03827
N
0.442
BGIBMGA006848
Bombyx mori
BGIBMGA006848
I
0.482
Bm4188
Brugia malayi
Bm4188
N
0.418
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.421
Cflo_00230--XP_624018.2_APIME
Camponotus floridanus
Cflo_00230--XP_624018.2_APIME
N
0.446
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.421
CGI_10017717
Crassostrea gigas
CGI_10017717
I
0.478
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.421
CLEC001918
Cimex lectularius
CLEC001918
I
0.455
CLEC003860
Cimex lectularius
CLEC003860
I
0.444
CMQ_8074
Grosmannia clavigera
CMQ_8074
I
0.415
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.460
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.421
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.449
D917_02150
Trichinella nativa
D917_02150
N
0.427
D918_09264
Trichuris suis
D918_09264
N
0.455
DAPPUDRAFT_19853
Daphnia pulex
DAPPUDRAFT_19853
I
0.482
DRE_06603
Drechslerella stenobrocha
DRE_06603
I
0.515
E5Q_03709
Mixia osmundae
E5Q_03709
N
0.422
EEL_0000223401
Elaeophora elaphi
EEL_0000223401
N
0.418
EFV61455
Trichinella spiralis
EFV61455
N
0.427
ENSCING00000009516
Ciona intestinalis
ENSCING00000009516
N
0.417
ENSCING00000018888
Ciona intestinalis
ENSCING00000018888
N
0.461
ENSCSAVG00000001086
Ciona savignyi
ENSCSAVG00000001086
N
0.419
ENSCSAVG00000009270
Ciona savignyi
ENSCSAVG00000009270
N
0.417
tox4b
Danio rerio
ENSDARG00000100163
I
0.448
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
0.448
tox4a
Gasterosteus aculeatus
ENSGACG00000014107
I
0.482
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
0.448
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
0.454
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.448
ENSGMOG00000015161
Gadus morhua
ENSGMOG00000015161
I
0.474
ENSMMUG00000014077
Macaca mulatta
ENSMMUG00000014077
N
0.448
ENSONIG00000000284
Oreochromis niloticus
ENSONIG00000000284
N
0.421
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.448
tox2
Oryzias latipes
ENSORLG00000004818
N
0.448
tox4b
Oryzias latipes
ENSORLG00000008779
N
0.421
ENSPFOG00000002336
Poecilia formosa
ENSPFOG00000002336
N
0.448
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
0.448
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
0.454
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
0.454
tox4b
Tetraodon nigroviridis
ENSTNIG00000003691
N
0.421
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
0.448
tox4b
Takifugu rubripes
ENSTRUG00000002594
N
0.421
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.454
ENSXMAG00000000362
Xiphophorus maculatus
ENSXMAG00000000362
I
0.477
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
0.448
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.449
estExt_fgeneshMC_pg.C_20910
Mucor circinelloides
estExt_fgeneshMC_pg.C_20910
I
0.645
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.449
e_gw1.30.104.1
Phycomyces blakesleeanus
e_gw1.30.104.1
N
0.612
F503_04824
Ophiostoma piceae uamh
F503_04824
I
0.417
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.425
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.448
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.448
fgeneshMC_pg.1_#_1771
Mucor circinelloides
fgeneshMC_pg.1_#_1771
I
0.560
fgeneshMC_pg.3_#_1190
Mucor circinelloides
fgeneshMC_pg.3_#_1190
I
0.689
G647_10093
Cladophialophora carrionii
G647_10093
I
0.442
GB43084
Apis mellifera
GB43084
I
0.474
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.421
GMDG_05273
Pseudogymnoascus destructans
GMDG_05273
I
0.416
GSTUM_00011974001
Tuber melanosporum
GSTUM_00011974001
I
0.547
gw1.16.190.1
Phycomyces blakesleeanus
gw1.16.190.1
N
0.549
gw1.72.30.1
Phycomyces blakesleeanus
gw1.72.30.1
I
0.572
HelroG145107
Helobdella robusta
HelroG145107
N
0.420
HHAL000823-PA
Halyomorpha halys
HHAL000823-PA
I
0.455
HMEL005034
Heliconius melpomene
HMEL005034
I
0.482
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.442
ISCW015985
Ixodes scapularis
ISCW015985
N
0.482
ISCW018867
Ixodes scapularis
ISCW018867
I
0.455
KGM_14572
Danaus plexippus
KGM_14572
I
0.482
LCUP006200
Lucilia cuprina
LCUP006200
N
0.529
LOAG_18151
Loa loa
LOAG_18151
N
0.418
LotgiG109021
Lottia gigantea
LotgiG109021
I
0.482
M408DRAFT_328926
Serendipita vermifera
M408DRAFT_328926
I
0.435
M437DRAFT_15090
Aureobasidium melanogenum
M437DRAFT_15090
I
0.416
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.449
MBM_02410
Marssonina brunnea
MBM_02410
I
0.449
MCINX005468
Melitaea cinxia
MCINX005468
I
0.482
MDOA008605
Musca domestica
MDOA008605
N
0.461
MELLADRAFT_85039
Melampsora laricipopulina
MELLADRAFT_85039
I
0.478
MESCA003479
Megaselia scalaris
MESCA003479
N
0.454
MVLG_01270
Microbotryum violaceum
MVLG_01270
I
0.526
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.439
nAv.1.0.1.g02116
Acanthocheilonema viteae
nAv.1.0.1.g02116
N
0.421
NCU02819
Neurospora crassa
NCU02819
D
0.449
nDi.2.2.2.g11099
Dirofilaria immitis
nDi.2.2.2.g11099
N
0.418
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.449
nOo.2.0.1.g12207
Onchocerca ochengi
nOo.2.0.1.g12207
N
0.418
nRc.2.0.1.g42996
Romanomermis culicivorax
nRc.2.0.1.g42996
N
0.418
NV10488
Nasonia vitripennis
NV10488
I
0.482
O9G_002262
Rozella allomycis
O9G_002262
I
0.449
Ocbimv22012197m.g
Octopus bimaculoides
Ocbimv22012197m.g
I
0.482
OFLC_0001222801
Onchocerca flexuosa
OFLC_0001222801
N
0.418
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.453
PAAG_05470
Paracoccidioides sp lutzii
PAAG_05470
N
0.442
PABG_05916
Paracoccidioides brasiliensis
PABG_05916
N
0.442
PGTG_10028
Puccinia graminis
PGTG_10028
I
0.492
PGTG_12120
Puccinia graminis
PGTG_12120
I
0.492
PIIN_05794
Piriformospora indica
PIIN_05794
I
0.435
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.449
PV04_00198
Capronia semiimmersa
PV04_00198
I
0.442
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.442
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.442
PV07_09313
Cladophialophora immunda
PV07_09313
I
0.442
PV08_04655
Exophiala spinifera
PV08_04655
I
0.442
PV09_06039
Verruconis gallopava
PV09_06039
N
0.419
PV10_01993
Exophiala mesophila
PV10_01993
I
0.442
PV11_09703
Exophiala sideris
PV11_09703
I
0.442
RO3G_05222
Rhizopus oryzae
RO3G_05222
N
0.415
RO3G_07013
Rhizopus oryzae
RO3G_07013
I
0.651
RO3G_07543
Rhizopus oryzae
RO3G_07543
I
0.578
RO3G_09728
Rhizopus oryzae
RO3G_09728
I
0.572
RO3G_16060
Rhizopus oryzae
RO3G_16060
I
0.677
RPRC000650
Rhodnius prolixus
RPRC000650
I
0.455
RSKR_0000733200
Rhabditophanes kr3021
RSKR_0000733200
N
0.433
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.432
Sakowv30024549m.g
Saccoglossus kowalevskii
Sakowv30024549m.g
N
0.495
SAPIO_CDS3355
Scedosporium apiospermum
SAPIO_CDS3355
I
0.524
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.449
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.449
SPU_002060
Strongylocentrotus purpuratus
SPU_002060
N
0.489
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.449
TC012723
Tribolium castaneum
TC012723
I
0.482
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.439
TMUE_s0009009400
Trichuris muris
TMUE_s0009009400
N
0.455
TMUE_s0011001600
Trichuris muris
TMUE_s0011001600
I
0.455
TTRE_0000108401
Trichuris trichiura
TTRE_0000108401
N
0.455
TTRE_0000401801
Trichuris trichiura
TTRE_0000401801
I
0.455
UCRNP2_5474
Neofusicoccum parvum
UCRNP2_5474
N
0.426
V499_08602
Pseudogymnoascus pannorum
V499_08602
I
0.416
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.421
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.421
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.421
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.421
WBGene00236865
Onchocerca volvulus
WBGene00236865
N
0.418
WUBG_03914
Wuchereria bancrofti
WUBG_03914
N
0.418
tox4.S
Xenopus laevis
XB-GENE-993810
I
0.448
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.448
Z517_02317
Fonsecaea pedrosoi
Z517_02317
I
0.442
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.442
Z519_04692
Cladophialophora bantiana
Z519_04692
I
0.442