AACERI_AaceriAEL005C (Saccharomycetaceae sp ashbya aceri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AACERI_AaceriAEL005C T326242_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.417 0.588
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.417 0.588
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.417 0.588
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGO12352 Sox 97 164

Links

Other Sox family TFs
Other Saccharomycetaceae sp ashbya aceri TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AEL005C Ashbya gossypii AGOS_AEL005C N 0.735
Ecym_5292 Eremothecium cymbalariae Ecym_5292 I 0.675
KLLA0_E17403g Kluyveromyces lactis KLLA0_E17403g N 0.546
CAGL0M10505g Candida glabrata CAGL0M10505g I 0.455
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I 0.443
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I 0.437
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I 0.429
CPAG_00203 Candida parapsilosis CPAG_00203 N 0.425
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I 0.424
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.418
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I 0.417
NHP10 Saccharomyces cerevisiae YDL002C D 0.417
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.417
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.417
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.417