CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Aqu1.209664
(
Amphimedon queenslandica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Aqu1.209664
T326447_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PAC:15708192
Sox
311
377
PKKPLSSYMLWLQEMRPSLKKKHPELSITEMSKKAGQLWKELKDKSKWEEKAKKLKEQYLIDMKEYE
Links
Other
Sox
family TFs
Other
Amphimedon queenslandica
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMUV_0000358401
Syphacia muris
SMUV_0000358401
N
0.513
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.508
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.483
EDI_340970
Entamoeba dispar
EDI_340970
N
0.469
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.464
LotgiG207546
Lottia gigantea
LotgiG207546
N
0.458
SMU15031660
Schmidtea mediterranea
SMU15031660
N
0.446
SPPG_03502
Spizellomyces punctatus
SPPG_03502
N
0.444
ENSAPLG00000003986
Anas platyrhynchos
ENSAPLG00000003986
N
0.443
Hmgb1
Rattus norvegicus
ENSRNOG00000029813
N
0.443
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.441
Thaps2728
Thalassiosira pseudonana
Thaps2728
N
0.441
WBGene00244511
Onchocerca volvulus
WBGene00244511
N
0.429
GPUH_0001272801
Gongylonema pulchrum
GPUH_0001272801
N
0.429
GPUH_0001539601
Gongylonema pulchrum
GPUH_0001539601
N
0.429
nOo.2.0.1.g02324
Onchocerca ochengi
nOo.2.0.1.g02324
N
0.429
Cflo_00230--XP_624018.2_APIME
Camponotus floridanus
Cflo_00230--XP_624018.2_APIME
N
0.427
BGLB002303
Biomphalaria glabrata
BGLB002303
N
0.422
CAOG_07557
Capsaspora owczarzaki
CAOG_07557
N
0.416
WUBG_03677
Wuchereria bancrofti
WUBG_03677
N
0.416
Bm2524
Brugia malayi
Bm2524
N
0.416
LOAG_04347
Loa loa
LOAG_04347
N
0.416
ALUE_0001798401
Ascaris lumbricoides
ALUE_0001798401
N
0.416
ASIM_0000114801
Anisakis simplex
ASIM_0000114801
N
0.416
ASU_13985
Ascaris suum
ASU_13985
N
0.416
EEL_0000829801
Elaeophora elaphi
EEL_0000829801
N
0.416
nAv.1.0.1.g03971
Acanthocheilonema viteae
nAv.1.0.1.g03971
N
0.416
nDi.2.2.2.g07477
Dirofilaria immitis
nDi.2.2.2.g07477
N
0.416
nLs.2.1.2.g07238
Litomosoides sigmodontis
nLs.2.1.2.g07238
N
0.416
OFLC_0000770701
Onchocerca flexuosa
OFLC_0000770701
N
0.416
TCNE_0001783901
Toxocara canis
TCNE_0001783901
N
0.416