CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_201206
(
Daphnia pulex
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
DAPPUDRAFT_201206
T327316_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX72246
Sox
583
649
PKRPQSSYMLWLNDSREQIKKDNPGISVTDLMKKGGEMWQKVEDRSIWEAKAKVAKEAYDKAMKEYT
Links
Other
Sox
family TFs
Other
Daphnia pulex
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GD25171
Drosophila simulans
FBgn0196483
I
0.454
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.431
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.447
MDOA014797
Musca domestica
MDOA014797
I
0.450
CLEC003860
Cimex lectularius
CLEC003860
I
0.434
MCINX001064
Melitaea cinxia
MCINX001064
I
0.425
KGM_13852
Danaus plexippus
KGM_13852
I
0.420
GK15658
Drosophila willistoni
FBgn0217663
I
0.454
GJ20604
Drosophila virilis
FBgn0207743
I
0.450
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.420
GM15692
Drosophila sechellia
FBgn0170608
I
0.454
GL17523
Drosophila persimilis
FBgn0155126
I
0.441
GI20867
Drosophila mojavensis
FBgn0143601
I
0.450
GH20784
Drosophila grimshawi
FBgn0128247
I
0.450
GG20749
Drosophila erecta
FBgn0112936
I
0.454
GF11622
Drosophila ananassae
FBgn0088662
I
0.454
GA14726
Drosophila pseudoobscura
FBgn0074753
I
0.441
HmgZ
Drosophila yakuba
FBgn0068145
I
0.454
HmgZ
Drosophila melanogaster
FBgn0010228
I
0.454
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.436
CapteG172235
Capitella teleta
CapteG172235
I
0.419
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.499
PHLGIDRAFT_36458
Phlebiopsis gigantea
PHLGIDRAFT_36458
N
0.430
SPU_023988
Strongylocentrotus purpuratus
SPU_023988
N
0.416