AABR07030543.1 (Rattus norvegicus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSRNOG00000051634 T329072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000068706 Sox 33 103
ENSRNOP00000068706 Sox 117 177

Links

Other Sox family TFs
Other Rattus norvegicus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AABR07045786.1 Rattus norvegicus ENSRNOG00000055923 N 0.741
LOC691030 Rattus norvegicus ENSRNOG00000057926 N 0.685
LOC681067 Rattus norvegicus ENSRNOG00000057013 N 0.682
LOC103694516 Rattus norvegicus ENSRNOG00000049646 N 0.675
RGD1561558 Rattus norvegicus ENSRNOG00000053609 N 0.675
LOC103694517 Rattus norvegicus ENSRNOG00000052269 N 0.671
RGD1566225 Rattus norvegicus ENSRNOG00000055742 N 0.661
RGD1560585 Rattus norvegicus ENSRNOG00000060534 N 0.655
LOC108349258 Rattus norvegicus ENSRNOG00000047496 N 0.648
AC127605.1 Rattus norvegicus ENSRNOG00000033156 N 0.511
Myotis_brandtii_Hmgb1_10003213 Myotis brandtii Myotis_brandtii_Hmgb1_10003213 N 0.465
AABR07041586.2 Rattus norvegicus ENSRNOG00000052769 N 0.462
AABR07040480.1 Rattus norvegicus ENSRNOG00000057407 N 0.460
csin112095 Clonorchis sinensis csin112095 N 0.452
Myotis_brandtii_Hmgb1_10026956 Myotis brandtii Myotis_brandtii_Hmgb1_10026956 N 0.446
ENSTBEG00000005874 Tupaia belangeri ENSTBEG00000005874 N 0.444
ENSOGAG00000027410 Otolemur garnettii ENSOGAG00000027410 N 0.442
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.441
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.439
AAC59859 Xenopus laevis AAC59859 N 0.438
AAH73449 Xenopus laevis AAH73449 N 0.438
ENSTBEG00000015340 Tupaia belangeri ENSTBEG00000015340 N 0.432
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.429
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.428
HmN_000761000 Hymenolepis microstoma HmN_000761000 N 0.427
ENSMEUG00000011289 Macropus eugenii ENSMEUG00000011289 N 0.425
ECANG7_07075 Echinococcus canadensis ECANG7_07075 N 0.422
EmuJ_000941400 Echinococcus multilocularis EmuJ_000941400 N 0.422
MCOS_0000588101 Mesocestoides corti MCOS_0000588101 N 0.422
TASK_0000795701 Taenia asiatica TASK_0000795701 N 0.422
TsM_000746700 Taenia solium TsM_000746700 N 0.422
T265_10726 Opisthorchis viverrini T265_10726 N 0.419
hmgb3b Danio rerio ENSDARG00000006408 N 0.418
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.416