CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AABR07041586.2
(
Rattus norvegicus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSRNOG00000052769
T329074_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000069878
Sox
8
74
RPKVRTSHVHFMMDFRNKMKEQQSNIYYDFTEFSRKWRFILKQEKRMYDSLAKHDKDRYKDEMRNYT
ENSRNOP00000069878
Sox
87
155
PRKPISSFLLFSMDHFDQLKEQHPNWTVAEVAKTSGRMWSRSTNVDKIPYEEKVELLWAKYLEEREVYY
Links
Other
Sox
family TFs
Other
Rattus norvegicus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOC108349258
Rattus norvegicus
ENSRNOG00000047496
N
0.542
RGD1566225
Rattus norvegicus
ENSRNOG00000055742
N
0.536
RGD1560585
Rattus norvegicus
ENSRNOG00000060534
N
0.531
LOC103694516
Rattus norvegicus
ENSRNOG00000049646
N
0.517
RGD1561558
Rattus norvegicus
ENSRNOG00000053609
N
0.517
LOC103694517
Rattus norvegicus
ENSRNOG00000052269
N
0.515
LOC681067
Rattus norvegicus
ENSRNOG00000057013
N
0.514
LOC691030
Rattus norvegicus
ENSRNOG00000057926
N
0.501
AABR07030543.1
Rattus norvegicus
ENSRNOG00000051634
N
0.462
AABR07045786.1
Rattus norvegicus
ENSRNOG00000055923
N
0.462
AC127605.1
Rattus norvegicus
ENSRNOG00000033156
N
0.430
AABR07040430.1
Rattus norvegicus
ENSRNOG00000056486
N
0.429