CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HBP1
(
Sorex araneus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSSARG00000007731
T329089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hbp1
M00194_2.00
Mus musculus
NNNDDNNN
NNNHHNNN
PBM
Badis et al.(2009)
Hbp1_2241
0.368
1.000
HBP1
M11299_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HBP1_Q2
0.368
1.000
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000007008
Sox
433
460
CKRPMNAFMLFAKKYRVEYTQMYPGKDN
Links
Other
Sox
family TFs
Other
Sorex araneus
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Hbp1
Dipodomys ordii
ENSDORG00000010576
I
0.741
HBP1
Echinops telfairi
ENSETEG00000018542
I
0.741
ENSMEUG00000011116
Macropus eugenii
ENSMEUG00000011116
I
0.741
HBP1
Homo sapiens
ENSG00000105856
D
0.731
Hbp1
Mus musculus
ENSMUSG00000002996
D
0.731
Ogr19131
Ophisaurus gracilis
Ogr19131
N
0.731
Ocbimv22007316m.g
Octopus bimaculoides
Ocbimv22007316m.g
N
0.719
ENSGMOG00000014613
Gadus morhua
ENSGMOG00000014613
N
0.680
GH23191
Drosophila grimshawi
FBgn0130648
N
0.592
SPU_021407
Strongylocentrotus purpuratus
SPU_021407
N
0.587
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
0.556
BBX
Homo sapiens
ENSG00000114439
D
0.529
SPOG_05006
Schizosaccharomyces cryophilus
SPOG_05006
N
0.502
PredSwiss_ASS2010_3146.2
Pneumocystis carinii
PredSwiss_ASS2010_3146.2
N
0.502
PPA10381
Pristionchus pacificus
PPA10381
N
0.501
DAPPUDRAFT_346928
Daphnia pulex
DAPPUDRAFT_346928
N
0.494
ENSTNIG00000011238
Tetraodon nigroviridis
ENSTNIG00000011238
N
0.486
Bra012244
Brassica rapa
Bra012244
N
0.478
Bra016455
Brassica rapa
Bra016455
N
0.478
RO3G_14677
Rhizopus oryzae
RO3G_14677
N
0.473
CaO19.1730
Candida albicans
CaO19.1730
N
0.473
CaO19.9298
Candida albicans
CaO19.9298
N
0.473
SOX11
Ornithorhynchus anatinus
ENSOANG00000006361
N
0.472
Sjc_0095610
Schistosoma japonicum
Sjc_0095610
N
0.472
PXEA_0001829801
Protopolystoma xenopodis
PXEA_0001829801
N
0.472
GLYMA03G08270
Glycine max
GLYMA03G08270
I
0.468
L798_04020
Zootermopsis nevadensis
L798_04020
N
0.465
L798_09360
Zootermopsis nevadensis
L798_09360
N
0.465
e_gw1.88.21.1
Fragilariopsis cylindrus
e_gw1.88.21.1
N
0.463
GLYMA02G25940
Glycine max
GLYMA02G25940
N
0.462
ENSTNIG00000019242
Tetraodon nigroviridis
ENSTNIG00000019242
N
0.457
HelroG148167
Helobdella robusta
HelroG148167
I
0.455
GLOINDRAFT_28614
Rhizophagus irregularis
GLOINDRAFT_28614
N
0.449
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
0.448
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
0.445
SPER_0000213401
Spirometra erinaceieuropaei
SPER_0000213401
N
0.436
GL20955
Drosophila persimilis
FBgn0158550
I
0.435
ACEP25270
Atta cephalotes
ACEP25270
N
0.433
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
0.419
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
0.419
SOX6
Echinops telfairi
ENSETEG00000001898
I
0.419
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
0.419
SOX13
Microcebus murinus
ENSMICG00000009236
I
0.419
SOX6
Procavia capensis
ENSPCAG00000001398
N
0.419
SOX17
Procavia capensis
ENSPCAG00000003188
I
0.419
SOX5
Sorex araneus
ENSSARG00000007963
I
0.419
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
0.419
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
0.419
MESCA000459
Megaselia scalaris
MESCA000459
I
0.419
SEPMUDRAFT_152382
Sphaerulina musiva
SEPMUDRAFT_152382
N
0.419
SMAR010127
Strigamia maritima
SMAR010127
N
0.419
ADIR005630
Anopheles dirus
ADIR005630
I
0.419
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
0.419
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
0.419
PHACADRAFT_58554
Phanerochaete carnosa
PHACADRAFT_58554
N
0.417
H101_08199
Trichophyton interdigitale
H101_08199
N
0.416
ENSAMEG00000013492
Ailuropoda melanoleuca
ENSAMEG00000013492
I
0.368
ENSAPLG00000007110
Anas platyrhynchos
ENSAPLG00000007110
I
0.368
HBP1
Bos taurus
ENSBTAG00000005524
I
0.368
HBP1
Canis familiaris
ENSCAFG00000003939
I
0.368
HBP1
Callithrix jacchus
ENSCJAG00000016260
I
0.368
HBP1
Cavia porcellus
ENSCPOG00000002375
I
0.368
ENSCSAG00000011395
Chlorocebus sabaeus
ENSCSAG00000011395
I
0.368
hbp1
Danio rerio
ENSDARG00000028517
I
0.368
HBP1
Dasypus novemcinctus
ENSDNOG00000004405
I
0.368
HBP1
Equus caballus
ENSECAG00000020969
I
0.368
ENSFALG00000010259
Ficedula albicollis
ENSFALG00000010259
I
0.368
HBP1
Felis catus
ENSFCAG00000005858
I
0.368
HBP1
Gallus gallus
ENSGALG00000008050
I
0.368
HBP1
Gorilla gorilla
ENSGGOG00000007788
I
0.368
ENSGMOG00000013782
Gadus morhua
ENSGMOG00000013782
I
0.368
ENSLACG00000009119
Latimeria chalumnae
ENSLACG00000009119
I
0.368
HBP1
Loxodonta africana
ENSLAFG00000005317
I
0.368
ENSLOCG00000015822
Lepisosteus oculatus
ENSLOCG00000015822
I
0.368
HBP1
Meleagris gallopavo
ENSMGAG00000006880
I
0.368
HBP1
Microcebus murinus
ENSMICG00000012858
I
0.368
HBP1
Myotis lucifugus
ENSMLUG00000012425
I
0.368
HBP1
Macaca mulatta
ENSMMUG00000015409
I
0.368
HBP1
Monodelphis domestica
ENSMODG00000016376
I
0.368
ENSMPUG00000018249
Mustela putorius furo
ENSMPUG00000018249
I
0.368
ENSNLEG00000008761
Nomascus leucogenys
ENSNLEG00000008761
I
0.368
ENSOARG00000005055
Ovis aries
ENSOARG00000005055
I
0.368
HBP1
Oryctolagus cuniculus
ENSOCUG00000012758
I
0.368
HBP1
Otolemur garnettii
ENSOGAG00000013102
I
0.368
ENSPANG00000024385
Papio anubis
ENSPANG00000024385
I
0.368
HBP1
Procavia capensis
ENSPCAG00000014060
I
0.368
ENSPFOG00000003951
Poecilia formosa
ENSPFOG00000003951
I
0.368
ENSPPYG00000017898
Pongo abelii
ENSPPYG00000017898
I
0.368
ENSPSIG00000012478
Pelodiscus sinensis
ENSPSIG00000012478
I
0.368
HBP1
Pan troglodytes
ENSPTRG00000019575
I
0.368
HBP1
Pteropus vampyrus
ENSPVAG00000014543
I
0.368
Hbp1
Rattus norvegicus
ENSRNOG00000008927
I
0.368
ENSSHAG00000010948
Sarcophilus harrisii
ENSSHAG00000010948
I
0.368
ENSSTOG00000013846
Ictidomys tridecemlineatus
ENSSTOG00000013846
I
0.368
HBP1
Tupaia belangeri
ENSTBEG00000007793
I
0.368
HBP1
Taeniopygia guttata
ENSTGUG00000003100
I
0.368
HBP1
Tursiops truncatus
ENSTTRG00000006826
I
0.368
HBP1
Vicugna pacos
ENSVPAG00000008629
I
0.368
ENSXMAG00000016455
Xiphophorus maculatus
ENSXMAG00000016455
I
0.368
Aan_R000440
Calypte anna
Aan_R000440
I
0.368
Afo_R001715
Aptenodytes forsteri
Afo_R001715
I
0.368
Alligator_sinensis_CCG000124.1
Alligator sinensis
Alligator_sinensis_CCG000124.1
I
0.368
Brh_R002687
Buceros rhinoceros
Brh_R002687
I
0.368
Cmyd_10005373
Chelonia mydas
Cmyd_10005373
I
0.368
ENSBTAP00000044156-D1
Bos grunniens
ENSBTAP00000044156-D1
I
0.368
ENSP00000420500
Macaca fascicularis
ENSP00000420500
I
0.368
Gfo_R011321
Geospiza fortis
Gfo_R011321
I
0.368
Myotis_brandtii_HBP1_10033916
Myotis brandtii
Myotis_brandtii_HBP1_10033916
I
0.368
Tal_R010197
Tyto alba
Tal_R010197
I
0.368
hbp1.S
Xenopus laevis
XB-GENE-17342930
I
0.368
hbp1
Xenopus tropicalis
XB-GENE-950343
I
0.368
hbp1.L
Xenopus laevis
XB-GENE-950348
I
0.368