CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000010294
(
Tetraodon nigroviridis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSTNIG00000010294
T329266_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000013197
Sox
122
180
TKKSPNAFMVFMKEKRRTVKPAIKRRGIRAVNAHLRSVWQSLTTEEQEKYCKEAEDQQL
Links
Other
Sox
family TFs
Other
Tetraodon nigroviridis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_17312
Ancylostoma duodenale
ANCDUO_17312
I
0.477
ANCCAN_22838
Ancylostoma caninum
ANCCAN_22838
I
0.462
ENSTRUG00000006849
Takifugu rubripes
ENSTRUG00000006849
N
0.453
PTTG_08991
Puccinia triticina
PTTG_08991
N
0.426
PTTG_09392
Puccinia triticina
PTTG_09392
N
0.426
HelroG147401
Helobdella robusta
HelroG147401
I
0.422