hbp1 (Tetraodon nigroviridis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSTNIG00000016027 T329278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hbp1
M00194_2.00 		Mus musculus
NNNDDNNN
NNNHHNNN		 PBM
Badis et al.(2009)
Hbp1_2241 		0.741 0.956
HBP1
M11299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HBP1_Q2 		0.741 0.956
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000019116 Sox 374 441

Links

Other Sox family TFs
Other Tetraodon nigroviridis TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000581901 Angiostrongylus costaricensis ACOC_0000581901 N
ANCDUO_08441 Ancylostoma duodenale ANCDUO_08441 N
BTMF_0000211801 Brugia timori BTMF_0000211801 N
DME_0000275701 Dracunculus medinensis DME_0000275701 N
EEL_0001053001 Elaeophora elaphi EEL_0001053001 N
NBR_0001150801 Nippostrongylus brasiliensis NBR_0001150801 N
nLs.2.1.2.g09068 Litomosoides sigmodontis nLs.2.1.2.g09068 N
nOo.2.0.1.g07408 Onchocerca ochengi nOo.2.0.1.g07408 N
OESDEN_02672 Oesophagostomum dentatum OESDEN_02672 N
SVUK_0000292101 Strongylus vulgaris SVUK_0000292101 N
TCLT_0000560301 Thelazia callipaeda TCLT_0000560301 N
TCNE_0000372001 Toxocara canis TCNE_0000372001 N
WBGene00241638 Onchocerca volvulus WBGene00241638 N
WUBG_13401 Wuchereria bancrofti WUBG_13401 N