CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_24487
(
Aegilops tauschii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
F775_24487
T329491_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT05799
Sox
154
189
RDNFRKEYKEKHPDVKQVSMIGKAGGEKWKSMSDAQ
Links
Other
Sox
family TFs
Other
Aegilops tauschii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIUR3_05701
Triticum urartu
TRIUR3_05701
N
0.622
Traes_5DL_BCFE39D13
Triticum aestivum
Traes_5DL_BCFE39D13
N
0.577
SBAD_0001127201
Soboliphyme baturini
SBAD_0001127201
N
0.530
OLONG_013579
Oryza longistaminata
OLONG_013579
N
0.500
cassava14282.m1
Manihot esculenta
cassava14282.m1
N
0.462
Traes_1DL_ED7FDC748
Triticum aestivum
Traes_1DL_ED7FDC748
N
0.459
HMG20A
Homo sapiens
ENSG00000140382
I
0.458
Aquca_004_00335
Aquilegia coerulea
Aquca_004_00335
I
0.443
Pavir.Ba01379
Panicum virgatum
Pavir.Ba01379
I
0.439
orange1.1g031906m.g
Citrus sinensis
orange1.1g031906m.g
I
0.438
TRAES3BF116200180CFD_g
Triticum aestivum
TRAES3BF116200180CFD_g
N
0.434
Gorai.002G115100
Gossypium raimondii
Gorai.002G115100
I
0.433
MDP0000242568
Malus domestica
MDP0000242568
I
0.423
GPLIN_001054700
Globodera pallida
GPLIN_001054700
N
0.418
CGOC_0001370301
Cylicostephanus goldi
CGOC_0001370301
N
0.416