CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM23082
(
Drosophila sechellia
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0177950
T329705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.741
0.986
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.519
0.609
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.519
0.609
Bbx
M00196_2.00
Mus musculus
TTCATTGA
TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.486
0.594
gei-3
M00711_2.00
Caenorhabditis elegans
NWNWMWDN
NHWKWNWN
PBM
Narasimhan et al.(2015)
pTH10038
0.468
0.493
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.440
0.536
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0204559
Sox
317
385
ARRPMNAFLIFCKRHRGIVKERYRTLENRAITKILGDWWAALDEQEKHCFTDLAQQNKDAFFNANPNFK
Links
Other
Sox
family TFs
Other
Drosophila sechellia
TFs
272 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBX
Homo sapiens
ENSG00000114439
D
0.519
Cic
Mus musculus
ENSMUSG00000005442
D
0.440
Bbx
Mus musculus
ENSMUSG00000022641
D
0.486
bbx
Drosophila melanogaster
FBgn0024251
D
0.741
gei-3
Caenorhabditis elegans
WBGene00001560
D
0.468
CpipJ_CPIJ005582
Culex pipiens
CpipJ_CPIJ005582
I
0.647
CpipJ_CPIJ012202
Culex pipiens
CpipJ_CPIJ012202
I
0.436
WUBG_04884
Wuchereria bancrofti
WUBG_04884
I
0.468
AAEL004381
Aedes aegypti
AAEL004381
I
0.436
AAEL011161
Aedes aegypti
AAEL011161
I
0.647
ACEP13490
Atta cephalotes
ACEP13490
I
0.579
ACEP18843
Atta cephalotes
ACEP18843
I
0.440
ACYPI004663
Acyrthosiphon pisum
ACYPI004663
I
0.447
ADAC008993
Anopheles darlingi
ADAC008993
I
0.436
ADAC009062
Anopheles darlingi
ADAC009062
I
0.429
AGAP003896
Anopheles gambiae
AGAP003896
I
0.485
AGAP003897
Anopheles gambiae
AGAP003897
I
0.485
AGAP013411
Anopheles gambiae
AGAP013411
I
0.436
BGIBMGA008274
Bombyx mori
BGIBMGA008274
I
0.690
BGIBMGA010263
Bombyx mori
BGIBMGA010263
I
0.436
Bm5934
Brugia malayi
Bm5934
I
0.468
CapteG223458
Capitella teleta
CapteG223458
I
0.567
CapteG39110
Capitella teleta
CapteG39110
I
0.567
CapteG39126
Capitella teleta
CapteG39126
I
0.440
CBN17413
Caenorhabditis brenneri
CBN17413
I
0.468
CGI_10015746
Crassostrea gigas
CGI_10015746
I
0.440
CGI_10018417
Crassostrea gigas
CGI_10018417
I
0.561
CJA07419
Caenorhabditis japonica
CJA07419
I
0.468
CPIJ005582
Culex quinquefasciatus
CPIJ005582
I
0.647
CPIJ012202
Culex quinquefasciatus
CPIJ012202
I
0.436
CRE24068
Caenorhabditis remanei
CRE24068
I
0.436
BBX
Anolis carolinensis
ENSACAG00000006532
I
0.516
ENSAMEG00000002574
Ailuropoda melanoleuca
ENSAMEG00000002574
I
0.519
ENSAMXG00000014362
Astyanax mexicanus
ENSAMXG00000014362
I
0.440
ENSAMXG00000017656
Astyanax mexicanus
ENSAMXG00000017656
I
0.512
ENSAMXG00000018358
Astyanax mexicanus
ENSAMXG00000018358
I
0.440
ENSAPLG00000005336
Anas platyrhynchos
ENSAPLG00000005336
I
0.519
BBX
Bos taurus
ENSBTAG00000006893
I
0.519
ENSBTAG00000019785
Bos taurus
ENSBTAG00000019785
I
0.440
CIC
Canis familiaris
ENSCAFG00000004858
I
0.440
BBX
Canis familiaris
ENSCAFG00000009867
I
0.519
ENSCING00000007655
Ciona intestinalis
ENSCING00000007655
I
0.417
BBX
Callithrix jacchus
ENSCJAG00000004843
I
0.519
CIC
Callithrix jacchus
ENSCJAG00000012847
I
0.440
BBX
Cavia porcellus
ENSCPOG00000003575
I
0.519
ENSCPOG00000004391
Cavia porcellus
ENSCPOG00000004391
I
0.440
ENSCSAG00000006313
Chlorocebus sabaeus
ENSCSAG00000006313
I
0.519
bbx
Danio rerio
ENSDARG00000012699
I
0.519
cica
Danio rerio
ENSDARG00000071150
I
0.440
BBX
Dasypus novemcinctus
ENSDNOG00000013923
I
0.519
CIC
Dasypus novemcinctus
ENSDNOG00000047657
I
0.440
Bbx
Dipodomys ordii
ENSDORG00000008169
I
0.519
Cic
Dipodomys ordii
ENSDORG00000008822
I
0.440
CIC
Equus caballus
ENSECAG00000011342
I
0.440
BBX
Equus caballus
ENSECAG00000023413
I
0.519
BBX
Erinaceus europaeus
ENSEEUG00000014092
I
0.519
BBX
Echinops telfairi
ENSETEG00000005122
I
0.519
CIC
Echinops telfairi
ENSETEG00000017271
I
0.440
ENSFALG00000006478
Ficedula albicollis
ENSFALG00000006478
I
0.516
BBX
Felis catus
ENSFCAG00000007296
I
0.519
ENSFCAG00000012737
Felis catus
ENSFCAG00000012737
I
0.440
CIC
Homo sapiens
ENSG00000079432
I
0.440
cicb
Gasterosteus aculeatus
ENSGACG00000009452
I
0.440
bbx
Gasterosteus aculeatus
ENSGACG00000020111
I
0.512
CIC
Gorilla gorilla
ENSGGOG00000000192
I
0.440
BBX
Gorilla gorilla
ENSGGOG00000028441
I
0.519
ENSGMOG00000005167
Gadus morhua
ENSGMOG00000005167
I
0.440
ENSGMOG00000015829
Gadus morhua
ENSGMOG00000015829
I
0.512
ENSLACG00000001134
Latimeria chalumnae
ENSLACG00000001134
I
0.519
ENSLACG00000002764
Latimeria chalumnae
ENSLACG00000002764
I
0.440
BBX
Loxodonta africana
ENSLAFG00000006362
I
0.512
ENSLOCG00000005165
Lepisosteus oculatus
ENSLOCG00000005165
I
0.419
ENSMEUG00000016625
Macropus eugenii
ENSMEUG00000016625
I
0.440
BBX
Meleagris gallopavo
ENSMGAG00000014384
I
0.519
ENSMICG00000015176
Microcebus murinus
ENSMICG00000015176
I
0.440
BBX
Myotis lucifugus
ENSMLUG00000007351
I
0.519
ENSMLUG00000016650
Myotis lucifugus
ENSMLUG00000016650
I
0.440
BBX
Macaca mulatta
ENSMMUG00000008787
I
0.519
ENSMMUG00000012174
Macaca mulatta
ENSMMUG00000012174
I
0.440
BBX
Monodelphis domestica
ENSMODG00000001748
I
0.519
ENSMPUG00000007557
Mustela putorius furo
ENSMPUG00000007557
I
0.440
ENSMPUG00000009907
Mustela putorius furo
ENSMPUG00000009907
I
0.519
ENSNLEG00000003524
Nomascus leucogenys
ENSNLEG00000003524
I
0.519
ENSNLEG00000010614
Nomascus leucogenys
ENSNLEG00000010614
I
0.440
BBX
Ornithorhynchus anatinus
ENSOANG00000007497
I
0.519
ENSOARG00000007985
Ovis aries
ENSOARG00000007985
I
0.440
ENSOARG00000018829
Ovis aries
ENSOARG00000018829
I
0.519
BBX
Oryctolagus cuniculus
ENSOCUG00000001686
I
0.519
ENSOCUG00000006458
Oryctolagus cuniculus
ENSOCUG00000006458
I
0.440
CIC
Otolemur garnettii
ENSOGAG00000003964
I
0.440
BBX
Otolemur garnettii
ENSOGAG00000008056
I
0.519
ENSONIG00000004775
Oreochromis niloticus
ENSONIG00000004775
I
0.510
ENSONIG00000004979
Oreochromis niloticus
ENSONIG00000004979
I
0.440
ENSONIG00000013108
Oreochromis niloticus
ENSONIG00000013108
I
0.440
BBX
Ochotona princeps
ENSOPRG00000017013
I
0.519
bbx
Oryzias latipes
ENSORLG00000005486
I
0.512
cica
Oryzias latipes
ENSORLG00000007091
I
0.440
cicb
Oryzias latipes
ENSORLG00000013259
I
0.440
ENSPANG00000009039
Papio anubis
ENSPANG00000009039
I
0.440
ENSPANG00000018335
Papio anubis
ENSPANG00000018335
I
0.519
BBX
Procavia capensis
ENSPCAG00000013443
I
0.519
CIC
Procavia capensis
ENSPCAG00000017001
I
0.440
ENSPFOG00000000116
Poecilia formosa
ENSPFOG00000000116
I
0.440
ENSPFOG00000000813
Poecilia formosa
ENSPFOG00000000813
I
0.512
ENSPFOG00000016231
Poecilia formosa
ENSPFOG00000016231
I
0.440
ENSPPYG00000010041
Pongo abelii
ENSPPYG00000010041
I
0.440
ENSPPYG00000013578
Pongo abelii
ENSPPYG00000013578
I
0.519
ENSPSIG00000015872
Pelodiscus sinensis
ENSPSIG00000015872
I
0.519
CIC
Pan troglodytes
ENSPTRG00000011051
I
0.440
BBX
Pan troglodytes
ENSPTRG00000015187
I
0.519
BBX
Pteropus vampyrus
ENSPVAG00000010534
I
0.519
CIC
Pteropus vampyrus
ENSPVAG00000016806
I
0.440
Bbx
Rattus norvegicus
ENSRNOG00000001971
I
0.486
Cic
Rattus norvegicus
ENSRNOG00000056118
I
0.440
ENSSHAG00000003009
Sarcophilus harrisii
ENSSHAG00000003009
I
0.519
CIC
Sus scrofa
ENSSSCG00000003030
I
0.440
BBX
Sus scrofa
ENSSSCG00000011943
I
0.519
ENSSTOG00000000852
Ictidomys tridecemlineatus
ENSSTOG00000000852
I
0.440
CIC
Tupaia belangeri
ENSTBEG00000009044
I
0.440
ENSTGUG00000013611
Taeniopygia guttata
ENSTGUG00000013611
I
0.516
CIC
Tetraodon nigroviridis
ENSTNIG00000003521
I
0.440
bbx
Tetraodon nigroviridis
ENSTNIG00000008596
I
0.519
bbx
Takifugu rubripes
ENSTRUG00000003077
I
0.479
CIC
Takifugu rubripes
ENSTRUG00000007193
I
0.440
ENSTSYG00000000857
Tarsius syrichta
ENSTSYG00000000857
I
0.519
BBX
Tursiops truncatus
ENSTTRG00000013182
I
0.519
CIC
Tursiops truncatus
ENSTTRG00000013873
I
0.440
BBX
Vicugna pacos
ENSVPAG00000007818
I
0.519
ENSXMAG00000009457
Xiphophorus maculatus
ENSXMAG00000009457
I
0.512
GA16961
Drosophila pseudoobscura
FBgn0076975
I
0.735
GF20922
Drosophila ananassae
FBgn0097927
I
0.735
GG19727
Drosophila erecta
FBgn0111928
I
0.741
GI21541
Drosophila mojavensis
FBgn0144271
I
0.735
GL20955
Drosophila persimilis
FBgn0158550
I
0.489
GJ16014
Drosophila virilis
FBgn0203199
I
0.735
GK25081
Drosophila willistoni
FBgn0227040
I
0.735
GE17925
Drosophila yakuba
FBgn0235361
I
0.741
GB43462
Apis mellifera
GB43462
I
0.440
GB48450
Apis mellifera
GB48450
I
0.647
HMEL012996
Heliconius melpomene
HMEL012996
I
0.690
ISCW010061
Ixodes scapularis
ISCW010061
I
0.681
KGM_16790
Danaus plexippus
KGM_16790
I
0.630
KGM_16941
Danaus plexippus
KGM_16941
I
0.436
L798_02329
Zootermopsis nevadensis
L798_02329
I
0.688
L798_08623
Zootermopsis nevadensis
L798_08623
I
0.440
LOAG_17202
Loa loa
LOAG_17202
I
0.468
LotgiG89909
Lottia gigantea
LotgiG89909
I
0.561
MCINX015089
Melitaea cinxia
MCINX015089
I
0.436
NV10910
Nasonia vitripennis
NV10910
I
0.446
PHUM079880
Pediculus humanus
PHUM079880
I
0.440
PHUM230960
Pediculus humanus
PHUM230960
I
0.487
POSPLDRAFT_104619
Postia placenta
POSPLDRAFT_104619
I
0.439
POSPLDRAFT_98507
Postia placenta
POSPLDRAFT_98507
I
0.439
RPRC001090
Rhodnius prolixus
RPRC001090
I
0.440
SINV12425
Solenopsis invicta
SINV12425
I
0.647
SMAR009315
Strigamia maritima
SMAR009315
I
0.440
SMAR012744
Strigamia maritima
SMAR012744
I
0.579
Smp_142600
Schistosoma mansoni
Smp_142600
I
0.466
SPU_025292
Strongylocentrotus purpuratus
SPU_025292
I
0.440
TC004697
Tribolium castaneum
TC004697
I
0.440
TC007499
Tribolium castaneum
TC007499
I
0.609
tetur21g00740
Tetranychus urticae
tetur21g00740
I
0.438
tetur23g01950
Tetranychus urticae
tetur23g01950
I
0.709
WBGene00241539
Onchocerca volvulus
WBGene00241539
I
0.468
YQE_03282
Dendroctonus ponderosae
YQE_03282
I
0.446
YQE_06837
Dendroctonus ponderosae
YQE_06837
I
0.569
Aan_R014485
Calypte anna
Aan_R014485
I
0.519
Afo_R006638
Aptenodytes forsteri
Afo_R006638
I
0.519
Alligator_sinensis_CCG005631.1
Alligator sinensis
Alligator_sinensis_CCG005631.1
I
0.440
Alligator_sinensis_CCG019960.1
Alligator sinensis
Alligator_sinensis_CCG019960.1
I
0.519
Brh_R008020
Buceros rhinoceros
Brh_R008020
I
0.516
Cflo_01544--XP_624175.2_APIME
Camponotus floridanus
Cflo_01544--XP_624175.2_APIME
I
0.440
Cflo_04908--XP_624175.2_APIME
Camponotus floridanus
Cflo_04908--XP_624175.2_APIME
I
0.647
Cmyd_10001800
Chelonia mydas
Cmyd_10001800
I
0.440
Cmyd_10015225
Chelonia mydas
Cmyd_10015225
I
0.519
ENSBTAP00000009058-D1
Bos grunniens
ENSBTAP00000009058-D1
I
0.519
ENSMMUP00000011518
Macaca fascicularis
ENSMMUP00000011518
I
0.519
ENSP00000160740-D1
Bos grunniens
ENSP00000160740-D1
I
0.440
ENSP00000160740
Macaca fascicularis
ENSP00000160740
I
0.440
Gfo_R002593
Geospiza fortis
Gfo_R002593
I
0.516
Hsal_01854--XP_624175.2_APIME
Harpegnathos saltator
Hsal_01854--XP_624175.2_APIME
I
0.674
Hsal_08911--XP_624175.2_APIME
Harpegnathos saltator
Hsal_08911--XP_624175.2_APIME
I
0.440
Myotis_brandtii_BBX_10016000
Myotis brandtii
Myotis_brandtii_BBX_10016000
I
0.519
Myotis_brandtii_Cic_10007129
Myotis brandtii
Myotis_brandtii_Cic_10007129
I
0.440
Ogr10275
Ophisaurus gracilis
Ogr10275
I
0.440
Ogr11041
Ophisaurus gracilis
Ogr11041
I
0.516
Pvit_02469
Pogona vitticeps
Pvit_02469
I
0.516
Pvit_02876
Pogona vitticeps
Pvit_02876
I
0.440
Tal_R013114
Tyto alba
Tal_R013114
I
0.519
gw.448.64.1
Branchiostoma floridae
gw.448.64.1
I
0.440
gw.46.292.1
Branchiostoma floridae
gw.46.292.1
I
0.440
Ocbimv22001036m.g
Octopus bimaculoides
Ocbimv22001036m.g
I
0.485
Ocbimv22037932m.g
Octopus bimaculoides
Ocbimv22037932m.g
I
0.436
Sakowv30039572m.g
Saccoglossus kowalevskii
Sakowv30039572m.g
I
0.545
Sakowv30042695m.g
Saccoglossus kowalevskii
Sakowv30042695m.g
I
0.440
CLEC003268
Cimex lectularius
CLEC003268
I
0.440
HHAL000065-PA
Halyomorpha halys
HHAL000065-PA
I
0.440
LCUP006498
Lucilia cuprina
LCUP006498
I
0.720
LDEC000948
Leptinotarsa decemlineata
LDEC000948
I
0.569
Sjc_0093980
Schistosoma japonicum
Sjc_0093980
I
0.472
SMU15002098
Schmidtea mediterranea
SMU15002098
I
0.446
cic
Xenopus tropicalis
XB-GENE-6467430
I
0.440
bbx.L
Xenopus laevis
XB-GENE-981431
I
0.519
XP_002932333
Xenopus tropicalis
XP_002932333
I
0.519
AALB003439
Anopheles albimanus
AALB003439
I
0.436
AARA001217
Anopheles arabiensis
AARA001217
I
0.436
AARA009897
Anopheles arabiensis
AARA009897
I
0.485
ACHR004909
Anopheles christyi
ACHR004909
I
0.485
ACHR006446
Anopheles christyi
ACHR006446
I
0.436
ACOM034716
Anopheles coluzzii
ACOM034716
I
0.485
ACUA015009
Anopheles culicifacies
ACUA015009
I
0.436
ADIR003322
Anopheles dirus
ADIR003322
I
0.436
ADIR003385
Anopheles dirus
ADIR003385
I
0.494
AEPI004245
Anopheles epiroticus
AEPI004245
I
0.485
AEPI005675
Anopheles epiroticus
AEPI005675
I
0.436
AFAF009600
Anopheles farauti
AFAF009600
I
0.436
AFAF016820
Anopheles farauti
AFAF016820
I
0.469
AFUN003674
Anopheles funestus
AFUN003674
I
0.510
AFUN006011
Anopheles funestus
AFUN006011
I
0.436
AMAM016153
Anopheles maculatus
AMAM016153
I
0.526
AMAM017484
Anopheles maculatus
AMAM017484
I
0.436
AMEC010127
Anopheles melas
AMEC010127
I
0.436
AMEC018835
Anopheles melas
AMEC018835
I
0.420
AMEM005678
Anopheles merus
AMEM005678
I
0.436
AMEM012787
Anopheles merus
AMEM012787
I
0.417
AMIN000258
Anopheles minimus
AMIN000258
I
0.531
AMIN003810
Anopheles minimus
AMIN003810
I
0.436
AQUA002577
Anopheles quadriannulatus
AQUA002577
I
0.485
AQUA008168
Anopheles quadriannulatus
AQUA008168
I
0.436
ASTEI00261
Anopheles stephensi
ASTEI00261
I
0.436
ASTEI00827
Anopheles stephensi
ASTEI00827
I
0.596
ASTEI11145
Anopheles stephensi
ASTEI11145
I
0.578
BGLB001462
Biomphalaria glabrata
BGLB001462
I
0.440
BGLB009093
Biomphalaria glabrata
BGLB009093
I
0.579
LLOJ007756
Lutzomyia longipalpis
LLOJ007756
I
0.436
MDOA012813
Musca domestica
MDOA012813
I
0.727
ANCCAN_00149
Ancylostoma caninum
ANCCAN_00149
I
0.468
ANCCEY_04123
Ancylostoma ceylanicum
ANCCEY_04123
I
0.468
ANCDUO_05529
Ancylostoma duodenale
ANCDUO_05529
I
0.468
ASIM_0000334601
Anisakis simplex
ASIM_0000334601
I
0.468
ASU_10300
Ascaris suum
ASU_10300
I
0.468
B_00914
Schistosoma haematobium
B_00914
I
0.472
csin104163
Clonorchis sinensis
csin104163
I
0.436
D917_02434
Trichinella nativa
D917_02434
I
0.440
D918_06270
Trichuris suis
D918_06270
I
0.440
ECPE_0001539401
Echinostoma caproni
ECPE_0001539401
I
0.418
EVEC_0000011601
Enterobius vermicularis
EVEC_0000011601
I
0.440
Hba_18941
Heterorhabditis bacteriophora
Hba_18941
I
0.468
L596_g5739
Steinernema carpocapsae
L596_g5739
I
0.468
L889_g11174
Steinernema feltiae
L889_g11174
I
0.468
L892_g3879
Steinernema scapterisci
L892_g3879
I
0.468
L893_g26751
Steinernema glaseri
L893_g26751
I
0.468
L898_g8837
Steinernema monticolum
L898_g8837
I
0.468
nAv.1.0.1.g00032
Acanthocheilonema viteae
nAv.1.0.1.g00032
I
0.472
nDi.2.2.2.g01012
Dirofilaria immitis
nDi.2.2.2.g01012
I
0.468
nLs.2.1.2.g07996
Litomosoides sigmodontis
nLs.2.1.2.g07996
I
0.468
nOo.2.0.1.g00287
Onchocerca ochengi
nOo.2.0.1.g00287
I
0.468
OESDEN_00065
Oesophagostomum dentatum
OESDEN_00065
I
0.468
OFLC_0001331401
Onchocerca flexuosa
OFLC_0001331401
I
0.468
PTRK_0000169700
Parastrongyloides trichosuri
PTRK_0000169700
I
0.426
SBAD_0000026401
Soboliphyme baturini
SBAD_0000026401
I
0.450
scaffold4-EXSNAP2012.129
Pristionchus exspectatus
scaffold4-EXSNAP2012.129
I
0.434
SCUD_0001673101
Schistosoma curassoni
SCUD_0001673101
I
0.472
SMUV_0001072601
Syphacia muris
SMUV_0001072601
I
0.440
SPAL_0001296500
Strongyloides papillosus
SPAL_0001296500
I
0.426
SSTP_0000494800
Strongyloides stercoralis
SSTP_0000494800
I
0.426
SVE_0052600
Strongyloides venezuelensis
SVE_0052600
I
0.426
SVUK_0000932601
Strongylus vulgaris
SVUK_0000932601
I
0.472
T265_01499
Opisthorchis viverrini
T265_01499
I
0.436
TCLT_0000608401
Thelazia callipaeda
TCLT_0000608401
I
0.468
TMUE_s0223001200
Trichuris muris
TMUE_s0223001200
I
0.440
TTRE_0000098801
Trichuris trichiura
TTRE_0000098801
I
0.440