CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB40960
(
Apis mellifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GB40960
T329983_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sox15
M03973_2.00
Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW
SELEX
Nitta et al.(2015)
Sox15_1
0.417
0.921
Sox15
M03974_2.00
Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB
SELEX
Nitta et al.(2015)
Sox15_2
0.417
0.921
Sox15
M06450_2.00
Drosophila melanogaster
RWACAATR
YATTGTWY
B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613
0.417
0.921
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB40960-PA
Sox
163
200
IRRPMNAFMVWAKVERKKLADENPDLHNADLSKMLGVC
Links
Other
Sox
family TFs
Other
Apis mellifera
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000792
Aedes aegypti
AAEL000792
I
0.741
AALB009865
Anopheles albimanus
AALB009865
I
0.543
AALB009868
Anopheles albimanus
AALB009868
I
0.656
AARA000827
Anopheles arabiensis
AARA000827
I
0.741
AARA005391
Anopheles arabiensis
AARA005391
I
0.663
AARA005393
Anopheles arabiensis
AARA005393
I
0.543
AARA011914
Anopheles arabiensis
AARA011914
I
0.541
AATE006542
Anopheles atroparvus
AATE006542
N
0.522
AATE012157
Anopheles atroparvus
AATE012157
N
0.688
ACAC_0000143401
Angiostrongylus cantonensis
ACAC_0000143401
N
0.553
ACEP10855
Atta cephalotes
ACEP10855
I
0.667
ACEP10859
Atta cephalotes
ACEP10859
I
0.548
ACEP25270
Atta cephalotes
ACEP25270
N
0.506
ACEP25857
Atta cephalotes
ACEP25857
I
0.741
ACHR009359
Anopheles christyi
ACHR009359
I
0.692
ACOM022800
Anopheles coluzzii
ACOM022800
I
0.663
ACOM022803
Anopheles coluzzii
ACOM022803
I
0.431
ACOM026664
Anopheles coluzzii
ACOM026664
N
0.735
ACOM034662
Anopheles coluzzii
ACOM034662
I
0.541
ACUA008554
Anopheles culicifacies
ACUA008554
I
0.656
ACUA011783
Anopheles culicifacies
ACUA011783
N
0.735
ACUA026266
Anopheles culicifacies
ACUA026266
I
0.547
ACUA026638
Anopheles culicifacies
ACUA026638
I
0.543
ACYPI006194
Acyrthosiphon pisum
ACYPI006194
I
0.445
ADIR005630
Anopheles dirus
ADIR005630
I
0.656
ADIR005633
Anopheles dirus
ADIR005633
I
0.543
ADIR009659
Anopheles dirus
ADIR009659
I
0.741
AEPI003628
Anopheles epiroticus
AEPI003628
I
0.663
AEPI007651
Anopheles epiroticus
AEPI007651
N
0.478
AEPI007946
Anopheles epiroticus
AEPI007946
N
0.686
AEPI010515
Anopheles epiroticus
AEPI010515
I
0.543
AFAF017335
Anopheles farauti
AFAF017335
I
0.642
AFUN009319
Anopheles funestus
AFUN009319
I
0.741
AFUN010196
Anopheles funestus
AFUN010196
I
0.543
AFUN010199
Anopheles funestus
AFUN010199
I
0.616
AGAP010923
Anopheles gambiae
AGAP010923
I
0.431
AGAP012033
Anopheles gambiae
AGAP012033
I
0.741
AMAM006332
Anopheles maculatus
AMAM006332
I
0.656
AMAM015893
Anopheles maculatus
AMAM015893
I
0.475
AMAM018985
Anopheles maculatus
AMAM018985
I
0.692
AMAM022760
Anopheles maculatus
AMAM022760
N
0.478
AMEC008804
Anopheles melas
AMEC008804
I
0.543
AMEC012053
Anopheles melas
AMEC012053
I
0.663
AMEC014560
Anopheles melas
AMEC014560
I
0.741
AMEC016085
Anopheles melas
AMEC016085
I
0.547
AMEM010579
Anopheles merus
AMEM010579
I
0.431
AMEM014190
Anopheles merus
AMEM014190
I
0.663
AMIN001219
Anopheles minimus
AMIN001219
I
0.541
AMIN008219
Anopheles minimus
AMIN008219
I
0.695
AMIN009301
Anopheles minimus
AMIN009301
I
0.663
AMIN009304
Anopheles minimus
AMIN009304
I
0.543
ANCCAN_22368
Ancylostoma caninum
ANCCAN_22368
N
0.509
ANCDUO_17471
Ancylostoma duodenale
ANCDUO_17471
I
0.423
ANCDUO_25812
Ancylostoma duodenale
ANCDUO_25812
N
0.608
AQUA001259
Anopheles quadriannulatus
AQUA001259
I
0.431
AQUA001262
Anopheles quadriannulatus
AQUA001262
I
0.656
AQUA004309
Anopheles quadriannulatus
AQUA004309
I
0.547
ASIS016076
Anopheles sinensis
ASIS016076
N
0.735
ASTEI06129
Anopheles stephensi
ASTEI06129
N
0.686
ASTEI06407
Anopheles stephensi
ASTEI06407
I
0.663
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12176-processed-gene-0.0
N
0.444
BBX
Homo sapiens
ENSG00000114439
D
0.417
BGIBMGA003080
Bombyx mori
BGIBMGA003080
I
0.663
BGIBMGA004367
Bombyx mori
BGIBMGA004367
I
0.695
BGLB002734
Biomphalaria glabrata
BGLB002734
I
0.741
BGLB010904
Biomphalaria glabrata
BGLB010904
I
0.621
CapteG70604
Capitella teleta
CapteG70604
I
0.416
Cflo_01077--XP_001122045.1_APIME
Camponotus floridanus
Cflo_01077--XP_001122045.1_APIME
N
0.735
CGI_10003991
Crassostrea gigas
CGI_10003991
I
0.417
CGOC_0001130501
Cylicostephanus goldi
CGOC_0001130501
I
0.420
CLEC006959
Cimex lectularius
CLEC006959
I
0.548
CLEC006961
Cimex lectularius
CLEC006961
I
0.607
CPIJ012042
Culex quinquefasciatus
CPIJ012042
I
0.656
CPIJ012500
Culex quinquefasciatus
CPIJ012500
N
0.735
CPIJ014016
Culex quinquefasciatus
CPIJ014016
N
0.522
CPIJ014424
Culex quinquefasciatus
CPIJ014424
I
0.560
CPIJ017659
Culex quinquefasciatus
CPIJ017659
I
0.516
CpipJ_CPIJ012042
Culex pipiens
CpipJ_CPIJ012042
I
0.656
CpipJ_CPIJ012500
Culex pipiens
CpipJ_CPIJ012500
N
0.735
CpipJ_CPIJ014016
Culex pipiens
CpipJ_CPIJ014016
N
0.522
CpipJ_CPIJ014424
Culex pipiens
CpipJ_CPIJ014424
I
0.560
CpipJ_CPIJ017659
Culex pipiens
CpipJ_CPIJ017659
I
0.516
CY34DRAFT_106474
Suillus luteus
CY34DRAFT_106474
N
0.418
D918_08316
Trichuris suis
D918_08316
N
0.575
DAPPUDRAFT_346928
Daphnia pulex
DAPPUDRAFT_346928
N
0.473
DAPPUDRAFT_35405
Daphnia pulex
DAPPUDRAFT_35405
I
0.445
ENSAMEG00000016773
Ailuropoda melanoleuca
ENSAMEG00000016773
I
0.431
ENSAMXG00000007582
Astyanax mexicanus
ENSAMXG00000007582
I
0.479
ENSCPOG00000024750
Cavia porcellus
ENSCPOG00000024750
I
0.559
ENSCSAVG00000000494
Ciona savignyi
ENSCSAVG00000000494
I
0.431
ENSDNOG00000034433
Dasypus novemcinctus
ENSDNOG00000034433
N
0.443
ENSDORG00000001450
Dipodomys ordii
ENSDORG00000001450
I
0.417
ENSDORG00000003967
Dipodomys ordii
ENSDORG00000003967
I
0.623
ENSDORG00000012440
Dipodomys ordii
ENSDORG00000012440
I
0.623
ENSFALG00000002572
Ficedula albicollis
ENSFALG00000002572
I
0.614
ENSMEUG00000008151
Macropus eugenii
ENSMEUG00000008151
I
0.598
ENSMEUG00000014457
Macropus eugenii
ENSMEUG00000014457
I
0.417
ENSMEUG00000015665
Macropus eugenii
ENSMEUG00000015665
I
0.537
ENSNLEG00000009528
Nomascus leucogenys
ENSNLEG00000009528
I
0.496
ENSNLEG00000010228
Nomascus leucogenys
ENSNLEG00000010228
I
0.463
ENSOARG00000009998
Ovis aries
ENSOARG00000009998
I
0.548
ENSPMAG00000010371
Petromyzon marinus
ENSPMAG00000010371
I
0.620
ENSPSIG00000009504
Pelodiscus sinensis
ENSPSIG00000009504
I
0.659
ENSPTRG00000005969
Pan troglodytes
ENSPTRG00000005969
I
0.567
ENSTGUG00000002931
Taeniopygia guttata
ENSTGUG00000002931
I
0.605
ENSTSYG00000012536
Tarsius syrichta
ENSTSYG00000012536
I
0.598
ENSTTRG00000005878
Tursiops truncatus
ENSTTRG00000005878
I
0.662
ENSVPAG00000000908
Vicugna pacos
ENSVPAG00000000908
I
0.623
GA21052
Drosophila pseudoobscura
FBgn0081040
I
0.417
GE12330
Drosophila yakuba
FBgn0230081
I
0.417
genemark-nMf.1.1.scaf16788-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf16788-processed-gene-0.1
I
0.489
GF12898
Drosophila ananassae
FBgn0089932
I
0.417
Gfo_R009506
Geospiza fortis
Gfo_R009506
I
0.576
GG22439
Drosophila erecta
FBgn0114611
I
0.417
GH20045
Drosophila grimshawi
FBgn0127509
I
0.417
GI20453
Drosophila mojavensis
FBgn0143189
I
0.417
GJ22304
Drosophila virilis
FBgn0209417
I
0.417
GK21748
Drosophila willistoni
FBgn0223733
I
0.417
GL17288
Drosophila persimilis
FBgn0154891
I
0.417
GLOINDRAFT_28614
Rhizophagus irregularis
GLOINDRAFT_28614
N
0.488
GLOINDRAFT_339213
Rhizophagus irregularis
GLOINDRAFT_339213
N
0.435
GLYMA01G28253
Glycine max
GLYMA01G28253
N
0.458
GM20225
Drosophila sechellia
FBgn0175108
I
0.417
GRMZM2G144398
Zea mays
GRMZM2G144398
N
0.436
GRMZM2G150348
Zea mays
GRMZM2G150348
N
0.433
HBP1
Homo sapiens
ENSG00000105856
D
0.437
HelroG148277
Helobdella robusta
HelroG148277
N
0.485
HMEL016850
Heliconius melpomene
HMEL016850
I
0.741
Hsal_04214--XP_001122045.1_APIME
Harpegnathos saltator
Hsal_04214--XP_001122045.1_APIME
N
0.735
Hsal_04828--XP_001122993.1_APIME
Harpegnathos saltator
Hsal_04828--XP_001122993.1_APIME
I
0.614
ISCW009925
Ixodes scapularis
ISCW009925
I
0.620
KGM_05609
Danaus plexippus
KGM_05609
N
0.735
L798_02392
Zootermopsis nevadensis
L798_02392
I
0.679
L798_04020
Zootermopsis nevadensis
L798_04020
N
0.520
L798_09360
Zootermopsis nevadensis
L798_09360
N
0.530
L798_12045
Zootermopsis nevadensis
L798_12045
I
0.521
L898_g3197
Steinernema monticolum
L898_g3197
I
0.515
LCUP001585
Lucilia cuprina
LCUP001585
I
0.663
LDEC007549
Leptinotarsa decemlineata
LDEC007549
N
0.735
LLOJ005525
Lutzomyia longipalpis
LLOJ005525
I
0.663
LotgiG120517
Lottia gigantea
LotgiG120517
I
0.450
LotgiG88815
Lottia gigantea
LotgiG88815
I
0.621
M404DRAFT_79773
Pisolithus tinctorius
M404DRAFT_79773
N
0.417
MCINX002905
Melitaea cinxia
MCINX002905
I
0.656
MCINX011114
Melitaea cinxia
MCINX011114
I
0.445
MDOA011444
Musca domestica
MDOA011444
I
0.417
MESCA000459
Megaselia scalaris
MESCA000459
I
0.656
MESCA009852
Megaselia scalaris
MESCA009852
I
0.543
ML23337a
Mnemiopsis leidyi
ML23337a
N
0.545
MPER_07337
Moniliophthora perniciosa
MPER_07337
N
0.443
NBR_0000360901
Nippostrongylus brasiliensis
NBR_0000360901
I
0.615
NBR_0002216901
Nippostrongylus brasiliensis
NBR_0002216901
I
0.615
nDi.2.2.2.g10379
Dirofilaria immitis
nDi.2.2.2.g10379
I
0.518
NECAME_14932
Necator americanus
NECAME_14932
N
0.434
NEMVEDRAFT_v1g163545
Nematostella vectensis
NEMVEDRAFT_v1g163545
I
0.435
nLs.2.1.2.g10155
Litomosoides sigmodontis
nLs.2.1.2.g10155
I
0.511
NV15963
Nasonia vitripennis
NV15963
I
0.445
Ocbimv22020621m.g
Octopus bimaculoides
Ocbimv22020621m.g
N
0.706
OESDEN_18796
Oesophagostomum dentatum
OESDEN_18796
N
0.428
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.437
PEQ_0000771101
Parascaris equorum
PEQ_0000771101
I
0.446
PHACADRAFT_58554
Phanerochaete carnosa
PHACADRAFT_58554
N
0.417
PHUM433270
Pediculus humanus
PHUM433270
N
0.735
PPAI008595
Phlebotomus papatasi
PPAI008595
N
0.666
PPAI009257
Phlebotomus papatasi
PPAI009257
N
0.542
PXEA_0001829801
Protopolystoma xenopodis
PXEA_0001829801
N
0.437
RPRC012125
Rhodnius prolixus
RPRC012125
N
0.735
RPRC012780
Rhodnius prolixus
RPRC012780
I
0.614
RPRC014334
Rhodnius prolixus
RPRC014334
I
0.548
RSKR_0000394100
Rhabditophanes kr3021
RSKR_0000394100
N
0.456
SEPMUDRAFT_152382
Sphaerulina musiva
SEPMUDRAFT_152382
N
0.509
SINV16626
Solenopsis invicta
SINV16626
I
0.741
SINV19744
Solenopsis invicta
SINV19744
I
0.548
SINV19753
Solenopsis invicta
SINV19753
I
0.621
SMAR010127
Strigamia maritima
SMAR010127
N
0.735
SOX1
Anolis carolinensis
ENSACAG00000006346
I
0.567
SOX10
Erinaceus europaeus
ENSEEUG00000011263
I
0.623
SOX10
Meleagris gallopavo
ENSMGAG00000012508
I
0.576
SOX10
Ochotona princeps
ENSOPRG00000013575
I
0.623
SOX10
Procavia capensis
ENSPCAG00000005913
I
0.623
SOX11
Ornithorhynchus anatinus
ENSOANG00000006361
N
0.437
SOX12
Sus scrofa
ENSSSCG00000021920
I
0.608
SOX13
Felis catus
ENSFCAG00000002900
I
0.605
SOX13
Microcebus murinus
ENSMICG00000009236
I
0.598
Sox15
Drosophila melanogaster
FBgn0005613
D
0.417
SOX17
Procavia capensis
ENSPCAG00000003188
I
0.701
SOX3
Pteropus vampyrus
ENSPVAG00000003166
I
0.548
SOX30
Procavia capensis
ENSPCAG00000010619
N
0.450
SOX5
Sorex araneus
ENSSARG00000007963
I
0.598
SOX6
Choloepus hoffmanni
ENSCHOG00000005751
I
0.598
SOX6
Erinaceus europaeus
ENSEEUG00000006749
I
0.598
SOX6
Echinops telfairi
ENSETEG00000001898
I
0.598
SOX6
Procavia capensis
ENSPCAG00000001398
N
0.598
SOX6
Tupaia belangeri
ENSTBEG00000002476
I
0.598
SOX9
Dasypus novemcinctus
ENSDNOG00000033826
I
0.663
SOX9
Pteropus vampyrus
ENSPVAG00000010505
I
0.623
sox9b
Danio rerio
ENSDARG00000043923
I
0.614
SPER_0000213401
Spirometra erinaceieuropaei
SPER_0000213401
N
0.476
SPU_021407
Strongylocentrotus purpuratus
SPU_021407
N
0.431
TC003791
Tribolium castaneum
TC003791
I
0.614
TC009854
Tribolium castaneum
TC009854
I
0.635
TCLT_0000083701
Thelazia callipaeda
TCLT_0000083701
I
0.598
tetur03g05800
Tetranychus urticae
tetur03g05800
I
0.417
WUBG_09252
Wuchereria bancrofti
WUBG_09252
I
0.511
XM_002306945.1
Populus trichocarpa
POPTR_0005s27390
I
0.441
XP_002935939
Xenopus tropicalis
XP_002935939
I
0.614
YQE_08560
Dendroctonus ponderosae
YQE_08560
I
0.483
YQE_13042
Dendroctonus ponderosae
YQE_13042
I
0.741