GLOINDRAFT_324308 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_324308 T330100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.432 0.299
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.432 0.299
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA10482 Sox 51 121

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GYMLUDRAFT_71519 Gymnopus luxurians GYMLUDRAFT_71519 I 0.492
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I 0.476
PAXINDRAFT_137714 Paxillus involutus PAXINDRAFT_137714 I 0.470
J056_002105 Wallemia ichthyophaga J056_002105 N 0.467
GLOTRDRAFT_98119 Gloeophyllum trabeum GLOTRDRAFT_98119 I 0.466
PTRG_11789 Pyrenophora triticirepentis PTRG_11789 I 0.451
CY34DRAFT_811615 Suillus luteus CY34DRAFT_811615 N 0.447
PITC_063570 Penicillium italicum PITC_063570 I 0.446
U727_00429890111 Penicillium solitum U727_00429890111 I 0.446
A1O5_13042 Cladophialophora psammophila A1O5_13042 I 0.445
PaG_02426 Pseudozyma aphidis PaG_02426 N 0.443
SERLA73DRAFT_84266 Serpula lacrymans SERLA73DRAFT_84266 I 0.442
CH063_09403 Colletotrichum higginsianum CH063_09403 I 0.441
FIBRA_08570 Fibroporia radiculosa FIBRA_08570 I 0.439
CERSUDRAFT_118953 Ceriporiopsis subvermispora CERSUDRAFT_118953 N 0.437
M378DRAFT_85158 Amanita muscaria M378DRAFT_85158 N 0.437
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N 0.437
PISMIDRAFT_104531 Pisolithus microcarpus PISMIDRAFT_104531 I 0.437
PLEOSDRAFT_1104604 Pleurotus ostreatus PLEOSDRAFT_1104604 I 0.437
fgenesh1_pg.C_scaffold_2000484 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000484 N 0.437
fgenesh1_pg.C_scaffold_7000440 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000440 N 0.437
JAAARDRAFT_209433 Jaapia argillacea JAAARDRAFT_209433 I 0.436
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I 0.436
A1O1_07971 Capronia coronata A1O1_07971 I 0.434
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.432
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.432
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.432
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I 0.431
GYMLUDRAFT_43821 Gymnopus luxurians GYMLUDRAFT_43821 N 0.431
MVLG_00275 Microbotryum violaceum MVLG_00275 N 0.431
PAXRUDRAFT_827004 Paxillus rubicundulus PAXRUDRAFT_827004 N 0.431
SERLA73DRAFT_141654 Serpula lacrymans SERLA73DRAFT_141654 I 0.431
DICSQDRAFT_18314 Dichomitus squalens DICSQDRAFT_18314 N 0.430
Moror_5744 Moniliophthora roreri Moror_5744 N 0.430
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N 0.424
FOMPIDRAFT_59166 Fomitopsis pinicola FOMPIDRAFT_59166 I 0.424
PHLGIDRAFT_121875 Phlebiopsis gigantea PHLGIDRAFT_121875 N 0.424
RHTO_08065 Rhodosporidium toruloides RHTO_08065 N 0.424
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I 0.422
FOMPIDRAFT_1124101 Fomitopsis pinicola FOMPIDRAFT_1124101 N 0.422
HMPREF1624_06196 Sporothrix schenckii HMPREF1624_06196 I 0.420
SCHCODRAFT_255090 Schizophyllum commune SCHCODRAFT_255090 N 0.420
SPBR_00669 Sporothrix brasiliensis SPBR_00669 I 0.420
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I 0.419
M422DRAFT_111122 Sphaerobolus stellatus M422DRAFT_111122 I 0.419
M422DRAFT_91926 Sphaerobolus stellatus M422DRAFT_91926 I 0.419
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.418
HYDPIDRAFT_99715 Hydnomerulius pinastri HYDPIDRAFT_99715 N 0.418
PDE_01613 Penicillium oxalicum PDE_01613 I 0.418
PILCRDRAFT_818013 Piloderma croceum PILCRDRAFT_818013 I 0.418
BN946_scf184844.g19 Trametes cinnabarina BN946_scf184844.g19 N 0.417
CERSUDRAFT_61596 Ceriporiopsis subvermispora CERSUDRAFT_61596 N 0.417
MVLG_00343 Microbotryum violaceum MVLG_00343 N 0.417
RTG_02343 Rhodotorula glutinis RTG_02343 N 0.417
TSTA_008530 Talaromyces stipitatus TSTA_008530 I 0.415