CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_340821
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_340821
T330123_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERZ96150
Sox
82
148
IPRPQNAWIIYRRDKYVTPEFEGIKPCIASKAIGERWKTESSEVVEYFVALSMLALENHHNKYGNYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_349274
Rhizophagus irregularis
GLOINDRAFT_349274
N
0.478
GLOINDRAFT_58615
Rhizophagus irregularis
GLOINDRAFT_58615
N
0.463
GLOINDRAFT_344442
Rhizophagus irregularis
GLOINDRAFT_344442
N
0.430
GLOINDRAFT_63363
Rhizophagus irregularis
GLOINDRAFT_63363
N
0.423
GLOINDRAFT_19430
Rhizophagus irregularis
GLOINDRAFT_19430
N
0.419