CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_51736
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_51736
T330186_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA20732
Sox
1
69
KPPNSFILFKSEIFKLVKLKYPNTTSRELSKIIGNMWNNTTKENKLPYIEKSIKIKKEHEELYPLQKYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOINDRAFT_75703
Rhizophagus irregularis
GLOINDRAFT_75703
N
0.458
HETIRDRAFT_458095
Heterobasidion irregulare
HETIRDRAFT_458095
N
0.450
Moror_2734
Moniliophthora roreri
Moror_2734
I
0.436
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.434
SNAPOd2T00000335001
Oikopleura dioica
SNAPOd2T00000335001
I
0.433
GMDG_01208
Pseudogymnoascus destructans
GMDG_01208
N
0.428
AACERI_AaceriADL331C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL331C
I
0.419
AGOS_ADL331C
Ashbya gossypii
AGOS_ADL331C
I
0.419
Ecym_3473
Eremothecium cymbalariae
Ecym_3473
I
0.419
JAAARDRAFT_93880
Jaapia argillacea
JAAARDRAFT_93880
I
0.419
TPHA_0C01510
Tetrapisispora phaffii
TPHA_0C01510
I
0.418