CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_96919
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_96919
T330223_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA11263
Sox
58
126
PPRSQNSYILYRRNESKRRNQLGLPNDLKRASKEISEMWRNEPPRIKNFFRILAAEGDRRHRLKFPDYK
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAC_04576
Metarhizium acridum
MAC_04576
I
0.471
MAJ_04611
Metarhizium majus
MAJ_04611
I
0.471
MBR_05977
Metarhizium brunneum
MBR_05977
I
0.471
MGU_06500
Metarhizium guizhouense
MGU_06500
I
0.471
X797_005729
Metarhizium robertsii
X797_005729
I
0.471
MAM_03716
Metarhizium album
MAM_03716
I
0.465
UV8b_6489
Ustilaginoidea virens
UV8b_6489
I
0.465
MANI_013732
Metarhizium anisopliae
MANI_013732
I
0.459
GLOINDRAFT_75094
Rhizophagus irregularis
GLOINDRAFT_75094
I
0.439
GLOINDRAFT_47422
Rhizophagus irregularis
GLOINDRAFT_47422
I
0.431
PHSY_004115
Pseudozyma hubeiensis
PHSY_004115
I
0.428
PAXRUDRAFT_106123
Paxillus rubicundulus
PAXRUDRAFT_106123
I
0.423
GGTG_04596
Gaeumannomyces graminis
GGTG_04596
I
0.422
OCS_06292
Ophiocordyceps sinensis
OCS_06292
I
0.422
SPPG_07085
Spizellomyces punctatus
SPPG_07085
I
0.421
SJAG_04009
Schizosaccharomyces japonicus
SJAG_04009
I
0.421
BOTBODRAFT_111636
Botryobasidium botryosum
BOTBODRAFT_111636
I
0.419
GLOINDRAFT_349054
Rhizophagus irregularis
GLOINDRAFT_349054
N
0.418
GLOINDRAFT_346310
Rhizophagus irregularis
GLOINDRAFT_346310
I
0.416
GLOINDRAFT_51431
Rhizophagus irregularis
GLOINDRAFT_51431
I
0.416
GLOINDRAFT_47134
Rhizophagus irregularis
GLOINDRAFT_47134
N
0.415
MYCFIDRAFT_86029
Pseudocercospora fijiensis
MYCFIDRAFT_86029
I
0.415
estExt_fgenesh1_pg.C_10913
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10913
I
0.415
estExt_fgenesh1_pg.C_20723
Cryphonectria parasitica
estExt_fgenesh1_pg.C_20723
I
0.415