ISCW021979 (Ixodes scapularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ISCW021979 T330693_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hbp1
M00194_2.00 		Mus musculus
NNNDDNNN
NNNHHNNN		 PBM
Badis et al.(2009)
Hbp1_2241 		0.568 0.632
HBP1
M11299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HBP1_Q2 		0.568 0.632
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.480 0.426
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.445 0.397
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.426 0.250
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.426 0.250
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.426 0.250
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.426 0.250
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.426 0.250
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW021979-PA Sox 55 122

Links

Other Sox family TFs
Other Ixodes scapularis TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22516_YPR065W Saccharomyces mikatae 22516_YPR065W I 0.433
23192_YPR065W Saccharomyces paradoxus 23192_YPR065W I 0.433
AAEL004381 Aedes aegypti AAEL004381 I 0.443
AALB003439 Anopheles albimanus AALB003439 I 0.451
Aan_R000440 Calypte anna Aan_R000440 I 0.568
AARA001217 Anopheles arabiensis AARA001217 I 0.451
ACEP18843 Atta cephalotes ACEP18843 I 0.445
ACHR006446 Anopheles christyi ACHR006446 I 0.451
ACUA015009 Anopheles culicifacies ACUA015009 I 0.451
ACYPI004663 Acyrthosiphon pisum ACYPI004663 I 0.445
ADAC008993 Anopheles darlingi ADAC008993 I 0.451
ADIR003322 Anopheles dirus ADIR003322 I 0.451
AEPI005675 Anopheles epiroticus AEPI005675 I 0.451
AFAF009600 Anopheles farauti AFAF009600 I 0.451
Afo_R001715 Aptenodytes forsteri Afo_R001715 I 0.568
AFUN006011 Anopheles funestus AFUN006011 I 0.451
AGAP013411 Anopheles gambiae AGAP013411 I 0.451
Alligator_sinensis_CCG000124.1 Alligator sinensis Alligator_sinensis_CCG000124.1 I 0.568
Alligator_sinensis_CCG005631.1 Alligator sinensis Alligator_sinensis_CCG005631.1 I 0.445
AMAM017484 Anopheles maculatus AMAM017484 I 0.451
AMEC010127 Anopheles melas AMEC010127 I 0.451
AMEC018835 Anopheles melas AMEC018835 I 0.422
AMEM005678 Anopheles merus AMEM005678 I 0.451
AMIN003810 Anopheles minimus AMIN003810 I 0.451
AQUA008168 Anopheles quadriannulatus AQUA008168 I 0.451
ASTEI00261 Anopheles stephensi ASTEI00261 I 0.451
BGIBMGA010263 Bombyx mori BGIBMGA010263 I 0.451
BGLB001462 Biomphalaria glabrata BGLB001462 I 0.435
Brh_R002687 Buceros rhinoceros Brh_R002687 I 0.568
CaO19.10341 Candida albicans CaO19.10341 I 0.420
CaO19.2823 Candida albicans CaO19.2823 I 0.453
CapteG39126 Capitella teleta CapteG39126 I 0.445
CBG00068 Caenorhabditis briggsae CBG00068 I 0.433
CD36_27640 Candida dubliniensis CD36_27640 I 0.420
Cflo_01544--XP_624175.2_APIME Camponotus floridanus Cflo_01544--XP_624175.2_APIME I 0.451
CGI_10003963 Crassostrea gigas CGI_10003963 I 0.569
CGI_10015746 Crassostrea gigas CGI_10015746 I 0.445
CLEC003268 Cimex lectularius CLEC003268 I 0.445
Cmyd_10001800 Chelonia mydas Cmyd_10001800 I 0.445
Cmyd_10005373 Chelonia mydas Cmyd_10005373 I 0.568
CPIJ012202 Culex quinquefasciatus CPIJ012202 I 0.451
CpipJ_CPIJ012202 Culex pipiens CpipJ_CPIJ012202 I 0.451
CRE24068 Caenorhabditis remanei CRE24068 I 0.445
csin104163 Clonorchis sinensis csin104163 I 0.436
CTRG_00834 Candida tropicalis CTRG_00834 I 0.420
D915_09544 Fasciola hepatica D915_09544 I 0.435
D917_02434 Trichinella nativa D917_02434 I 0.445
D918_06270 Trichuris suis D918_06270 I 0.445
DAPPUDRAFT_313324 Daphnia pulex DAPPUDRAFT_313324 I 0.582
DAPPUDRAFT_37735 Daphnia pulex DAPPUDRAFT_37735 I 0.433
DEHA2E09460g Debaryomyces hansenii DEHA2E09460g I 0.420
ECANG7_10853 Echinococcus canadensis ECANG7_10853 I 0.427
ECPE_0001539401 Echinostoma caproni ECPE_0001539401 I 0.435
EFV48447 Trichinella spiralis EFV48447 I 0.433
HBP1 Anolis carolinensis ENSACAG00000015023 I 0.562
ENSAMEG00000013492 Ailuropoda melanoleuca ENSAMEG00000013492 I 0.568
ENSAMXG00000014362 Astyanax mexicanus ENSAMXG00000014362 I 0.436
ENSAMXG00000017678 Astyanax mexicanus ENSAMXG00000017678 I 0.568
ENSAMXG00000018358 Astyanax mexicanus ENSAMXG00000018358 I 0.445
ENSAPLG00000007110 Anas platyrhynchos ENSAPLG00000007110 I 0.568
HBP1 Bos taurus ENSBTAG00000005524 I 0.568
ENSBTAG00000019785 Bos taurus ENSBTAG00000019785 I 0.445
ENSBTAP00000044156-D1 Bos grunniens ENSBTAP00000044156-D1 I 0.568
HBP1 Canis familiaris ENSCAFG00000003939 I 0.568
CIC Canis familiaris ENSCAFG00000004858 I 0.445
ENSCING00000007655 Ciona intestinalis ENSCING00000007655 I 0.451
CIC Callithrix jacchus ENSCJAG00000012847 I 0.445
HBP1 Callithrix jacchus ENSCJAG00000016260 I 0.568
HBP1 Cavia porcellus ENSCPOG00000002375 I 0.568
ENSCPOG00000004391 Cavia porcellus ENSCPOG00000004391 I 0.445
ENSCSAG00000011395 Chlorocebus sabaeus ENSCSAG00000011395 I 0.568
hbp1 Danio rerio ENSDARG00000028517 I 0.568
cica Danio rerio ENSDARG00000071150 I 0.436
HBP1 Dasypus novemcinctus ENSDNOG00000004405 I 0.568
CIC Dasypus novemcinctus ENSDNOG00000047657 I 0.445
Cic Dipodomys ordii ENSDORG00000008822 I 0.445
CIC Equus caballus ENSECAG00000011342 I 0.445
HBP1 Equus caballus ENSECAG00000020969 I 0.568
CIC Echinops telfairi ENSETEG00000017271 I 0.445
ENSFALG00000010259 Ficedula albicollis ENSFALG00000010259 I 0.568
HBP1 Felis catus ENSFCAG00000005858 I 0.568
ENSFCAG00000012737 Felis catus ENSFCAG00000012737 I 0.445
CIC Homo sapiens ENSG00000079432 I 0.445
HBP1 Homo sapiens ENSG00000105856 D 0.568
cicb Gasterosteus aculeatus ENSGACG00000009452 I 0.445
hbp1 Gasterosteus aculeatus ENSGACG00000010054 I 0.477
ENSGACG00000019192 Gasterosteus aculeatus ENSGACG00000019192 I 0.498
HBP1 Gallus gallus ENSGALG00000008050 I 0.568
CIC Gorilla gorilla ENSGGOG00000000192 I 0.445
HBP1 Gorilla gorilla ENSGGOG00000007788 I 0.568
ENSGMOG00000005167 Gadus morhua ENSGMOG00000005167 I 0.445
ENSGMOG00000013782 Gadus morhua ENSGMOG00000013782 I 0.568
ENSLACG00000002764 Latimeria chalumnae ENSLACG00000002764 I 0.445
ENSLACG00000009119 Latimeria chalumnae ENSLACG00000009119 I 0.562
HBP1 Loxodonta africana ENSLAFG00000005317 I 0.568
ENSLOCG00000004648 Lepisosteus oculatus ENSLOCG00000004648 I 0.433
ENSLOCG00000015822 Lepisosteus oculatus ENSLOCG00000015822 I 0.568
ENSMEUG00000016625 Macropus eugenii ENSMEUG00000016625 I 0.445
HBP1 Meleagris gallopavo ENSMGAG00000006880 I 0.568
HBP1 Microcebus murinus ENSMICG00000012858 I 0.568
ENSMICG00000015176 Microcebus murinus ENSMICG00000015176 I 0.445
HBP1 Myotis lucifugus ENSMLUG00000012425 I 0.568
ENSMLUG00000016650 Myotis lucifugus ENSMLUG00000016650 I 0.445
ENSMMUG00000012174 Macaca mulatta ENSMMUG00000012174 I 0.445
HBP1 Macaca mulatta ENSMMUG00000015409 I 0.568
HBP1 Monodelphis domestica ENSMODG00000016376 I 0.568
ENSMPUG00000007557 Mustela putorius furo ENSMPUG00000007557 I 0.445
ENSMPUG00000018249 Mustela putorius furo ENSMPUG00000018249 I 0.568
Hbp1 Mus musculus ENSMUSG00000002996 D 0.568
Cic Mus musculus ENSMUSG00000005442 D 0.445
ENSNLEG00000008761 Nomascus leucogenys ENSNLEG00000008761 I 0.568
ENSNLEG00000010614 Nomascus leucogenys ENSNLEG00000010614 I 0.445
HBP1 Ornithorhynchus anatinus ENSOANG00000003174 I 0.556
ENSOARG00000005055 Ovis aries ENSOARG00000005055 I 0.568
ENSOARG00000007985 Ovis aries ENSOARG00000007985 I 0.445
ENSOCUG00000006458 Oryctolagus cuniculus ENSOCUG00000006458 I 0.445
HBP1 Oryctolagus cuniculus ENSOCUG00000012758 I 0.568
CIC Otolemur garnettii ENSOGAG00000003964 I 0.445
HBP1 Otolemur garnettii ENSOGAG00000013102 I 0.568
ENSONIG00000004979 Oreochromis niloticus ENSONIG00000004979 I 0.436
ENSONIG00000008523 Oreochromis niloticus ENSONIG00000008523 I 0.568
ENSONIG00000011868 Oreochromis niloticus ENSONIG00000011868 I 0.543
ENSONIG00000013108 Oreochromis niloticus ENSONIG00000013108 I 0.445
hbp1 Oryzias latipes ENSORLG00000004396 I 0.568
cica Oryzias latipes ENSORLG00000007091 I 0.445
ENSORLG00000009474 Oryzias latipes ENSORLG00000009474 I 0.514
cicb Oryzias latipes ENSORLG00000013259 I 0.445
ENSP00000160740 Macaca fascicularis ENSP00000160740 I 0.445
ENSP00000160740-D1 Bos grunniens ENSP00000160740-D1 I 0.445
ENSP00000420500 Macaca fascicularis ENSP00000420500 I 0.568
ENSPANG00000009039 Papio anubis ENSPANG00000009039 I 0.445
ENSPANG00000024385 Papio anubis ENSPANG00000024385 I 0.568
HBP1 Procavia capensis ENSPCAG00000014060 I 0.568
CIC Procavia capensis ENSPCAG00000017001 I 0.445
ENSPFOG00000000116 Poecilia formosa ENSPFOG00000000116 I 0.445
ENSPFOG00000003951 Poecilia formosa ENSPFOG00000003951 I 0.568
ENSPFOG00000012271 Poecilia formosa ENSPFOG00000012271 I 0.549
ENSPFOG00000016231 Poecilia formosa ENSPFOG00000016231 I 0.445
ENSPMAG00000002631 Petromyzon marinus ENSPMAG00000002631 I 0.522
ENSPPYG00000010041 Pongo abelii ENSPPYG00000010041 I 0.445
ENSPPYG00000017898 Pongo abelii ENSPPYG00000017898 I 0.568
ENSPSIG00000012478 Pelodiscus sinensis ENSPSIG00000012478 I 0.568
CIC Pan troglodytes ENSPTRG00000011051 I 0.445
HBP1 Pan troglodytes ENSPTRG00000019575 I 0.568
HBP1 Pteropus vampyrus ENSPVAG00000014543 I 0.568
CIC Pteropus vampyrus ENSPVAG00000016806 I 0.445
Hbp1 Rattus norvegicus ENSRNOG00000008927 I 0.568
Cic Rattus norvegicus ENSRNOG00000056118 I 0.445
ENSSHAG00000010948 Sarcophilus harrisii ENSSHAG00000010948 I 0.568
CIC Sus scrofa ENSSSCG00000003030 I 0.445
ENSSTOG00000000852 Ictidomys tridecemlineatus ENSSTOG00000000852 I 0.445
ENSSTOG00000013846 Ictidomys tridecemlineatus ENSSTOG00000013846 I 0.568
HBP1 Tupaia belangeri ENSTBEG00000007793 I 0.568
CIC Tupaia belangeri ENSTBEG00000009044 I 0.445
HBP1 Taeniopygia guttata ENSTGUG00000003100 I 0.568
ENSTNIG00000002023 Tetraodon nigroviridis ENSTNIG00000002023 I 0.514
CIC Tetraodon nigroviridis ENSTNIG00000003521 I 0.445
hbp1 Tetraodon nigroviridis ENSTNIG00000016027 I 0.568
CIC Takifugu rubripes ENSTRUG00000007193 I 0.445
ENSTRUG00000011881 Takifugu rubripes ENSTRUG00000011881 I 0.575
hbp1 Takifugu rubripes ENSTRUG00000016990 I 0.568
HBP1 Tursiops truncatus ENSTTRG00000006826 I 0.568
CIC Tursiops truncatus ENSTTRG00000013873 I 0.445
HBP1 Vicugna pacos ENSVPAG00000008629 I 0.568
ENSXMAG00000007586 Xiphophorus maculatus ENSXMAG00000007586 I 0.549
ENSXMAG00000016455 Xiphophorus maculatus ENSXMAG00000016455 I 0.568
estExt_fgenesh1_pg.C_chr_3.10092 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10092 I 0.420
estExt_fgenesh2_pg.C_1670092 Branchiostoma floridae estExt_fgenesh2_pg.C_1670092 I 0.419
e_gw.61.169.1 Branchiostoma floridae e_gw.61.169.1 I 0.557
e_gw.633.29.1 Branchiostoma floridae e_gw.633.29.1 I 0.557
GF17645 Drosophila ananassae FBgn0094663 I 0.480
GG23823 Drosophila erecta FBgn0115962 I 0.480
GH23608 Drosophila grimshawi FBgn0131065 I 0.469
GI22721 Drosophila mojavensis FBgn0145448 I 0.506
GL12097 Drosophila persimilis FBgn0149705 I 0.507
GM23104 Drosophila sechellia FBgn0177972 I 0.480
GD19345 Drosophila simulans FBgn0190847 I 0.480
GJ23448 Drosophila virilis FBgn0210547 I 0.479
GK10919 Drosophila willistoni FBgn0212930 I 0.480
GE25659 Drosophila yakuba FBgn0242721 I 0.480
cic Drosophila melanogaster FBgn0262582 D 0.480
GA30228 Drosophila pseudoobscura FBgn0263363 I 0.507
fgenesh1_pg.scaffold_35000054 Monosiga brevicollis fgenesh1_pg.scaffold_35000054 I 0.451
G210_0578 Candida maltosa G210_0578 I 0.420
GALMADRAFT_340474 Galerina marginata GALMADRAFT_340474 I 0.423
GB43462 Apis mellifera GB43462 I 0.445
GB51010 Apis mellifera GB51010 I 0.459
Gfo_R011321 Geospiza fortis Gfo_R011321 I 0.568
GNLVRS01_PISO0K11912g Millerozyma farinosa GNLVRS01_PISO0K11912g I 0.420
GNLVRS01_PISO0L11913g Millerozyma farinosa GNLVRS01_PISO0L11913g I 0.420
GSTUM_00008644001 Tuber melanosporum GSTUM_00008644001 I 0.434
gw.448.64.1 Branchiostoma floridae gw.448.64.1 I 0.445
gw.46.292.1 Branchiostoma floridae gw.46.292.1 I 0.445
HDID_0000236901 Hymenolepis diminuta HDID_0000236901 I 0.427
HelroG148167 Helobdella robusta HelroG148167 I 0.430
HHAL000065-PA Halyomorpha halys HHAL000065-PA I 0.445
HmN_000874900 Hymenolepis microstoma HmN_000874900 I 0.427
HNAJ_0001105001 Hymenolepis nana HNAJ_0001105001 I 0.427
Hsal_08911--XP_624175.2_APIME Harpegnathos saltator Hsal_08911--XP_624175.2_APIME I 0.435
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.418
KGM_16941 Danaus plexippus KGM_16941 I 0.456
KNAG_0H00720 Kazachstania naganishii KNAG_0H00720 I 0.426
L798_08623 Zootermopsis nevadensis L798_08623 I 0.435
L798_09303 Zootermopsis nevadensis L798_09303 I 0.596
L798_11051 Zootermopsis nevadensis L798_11051 I 0.436
LCUP009387 Lucilia cuprina LCUP009387 I 0.480
LELG_00108 Lodderomyces elongisporus LELG_00108 I 0.426
LLOJ007756 Lutzomyia longipalpis LLOJ007756 I 0.445
LotgiG100217 Lottia gigantea LotgiG100217 I 0.433
MCINX015089 Melitaea cinxia MCINX015089 I 0.456
MDOA004531 Musca domestica MDOA004531 I 0.480
MELLADRAFT_111305 Melampsora laricipopulina MELLADRAFT_111305 I 0.416
ML040423a Mnemiopsis leidyi ML040423a I 0.597
Moror_2734 Moniliophthora roreri Moror_2734 I 0.417
Myotis_brandtii_Cic_10007129 Myotis brandtii Myotis_brandtii_Cic_10007129 I 0.445
Myotis_brandtii_HBP1_10033916 Myotis brandtii Myotis_brandtii_HBP1_10033916 I 0.568
NCAS_0A11120 Naumovozyma castellii NCAS_0A11120 I 0.441
NEMVEDRAFT_v1g120503 Nematostella vectensis NEMVEDRAFT_v1g120503 I 0.566
NEMVEDRAFT_v1g122926 Nematostella vectensis NEMVEDRAFT_v1g122926 I 0.460
NEMVEDRAFT_v1g19525 Nematostella vectensis NEMVEDRAFT_v1g19525 I 0.428
NV10910 Nasonia vitripennis NV10910 I 0.451
NV14822 Nasonia vitripennis NV14822 I 0.426
Ocbimv22001036m.g Octopus bimaculoides Ocbimv22001036m.g I 0.461
Ocbimv22037932m.g Octopus bimaculoides Ocbimv22037932m.g I 0.445
Ogr10275 Ophisaurus gracilis Ogr10275 I 0.445
PAAG_02636 Paracoccidioides sp lutzii PAAG_02636 I 0.434
PABG_03121 Paracoccidioides brasiliensis PABG_03121 I 0.434
PGUG_05440 Candida guilliermondii PGUG_05440 I 0.420
PGUG_05440 Meyerozyma guilliermondii PGUG_05440 I 0.420
PHUM079880 Pediculus humanus PHUM079880 I 0.445
PHUM534240 Pediculus humanus PHUM534240 I 0.541
PHUM605170 Pediculus humanus PHUM605170 I 0.432
PICST_67218 Scheffersomyces stipitis PICST_67218 I 0.420
PTSG_02101 Salpingoeca rosetta PTSG_02101 I 0.419
Pvit_02876 Pogona vitticeps Pvit_02876 I 0.445
Pvit_03004 Pogona vitticeps Pvit_03004 I 0.562
RPRC001090 Rhodnius prolixus RPRC001090 I 0.445
SAKL0B07656g Lachancea kluyveri SAKL0B07656g I 0.437
Sakowv30042695m.g Saccoglossus kowalevskii Sakowv30042695m.g I 0.445
SBAD_0000026401 Soboliphyme baturini SBAD_0000026401 I 0.435
Scas_Contig667.28 Saccharomyces castellii Scas_Contig667.28 I 0.441
SMAR009315 Strigamia maritima SMAR009315 I 0.451
SMAR013235 Strigamia maritima SMAR013235 I 0.573
SNAPOd2T00000335001 Oikopleura dioica SNAPOd2T00000335001 I 0.475
SPU_025292 Strongylocentrotus purpuratus SPU_025292 I 0.451
SU7_3656 Saccharomyces arboricola SU7_3656 I 0.433
T265_01499 Opisthorchis viverrini T265_01499 I 0.436
Tal_R010197 Tyto alba Tal_R010197 I 0.568
TASK_0001001001 Taenia asiatica TASK_0001001001 I 0.427
TC004697 Tribolium castaneum TC004697 I 0.445
TC007345 Tribolium castaneum TC007345 I 0.428
tetur21g00740 Tetranychus urticae tetur21g00740 I 0.451
tetur23g00840 Tetranychus urticae tetur23g00840 I 0.438
TMUE_s0223001200 Trichuris muris TMUE_s0223001200 I 0.445
TriadG55419 Trichoplax adhaerens TriadG55419 I 0.566
TsM_000188900 Taenia solium TsM_000188900 I 0.427
TTAC_0000238201 Hydatigera taeniaeformis TTAC_0000238201 I 0.427
TTRE_0000098801 Trichuris trichiura TTRE_0000098801 I 0.445
hbp1.S Xenopus laevis XB-GENE-17342930 I 0.562
cic Xenopus tropicalis XB-GENE-6467430 I 0.445
hbp1 Xenopus tropicalis XB-GENE-950343 I 0.562
hbp1.L Xenopus laevis XB-GENE-950348 I 0.562
XP_002155149.1 Hydra magnipapillata XP_002155149.1 I 0.525
XP_002160058.1 Hydra magnipapillata XP_002160058.1 I 0.421
ROX1 Saccharomyces cerevisiae YPR065W D 0.426
YQE_03282 Dendroctonus ponderosae YQE_03282 I 0.442