CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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JAAARDRAFT_33297
(
Jaapia argillacea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
JAAARDRAFT_33297
T330715_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.425
0.391
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.425
0.391
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN
NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.425
0.391
ROX1
M11346_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.425
0.391
ROX1
M11347_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.425
0.391
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDQ59727
Sox
165
235
IPRPRNPFIIFRCHYAKDPNNDGLLSSTGERSVSKRAAEAWSRLPSQQKQHFKLLAELEKKQHELRYPDYR
Links
Other
Sox
family TFs
Other
Jaapia argillacea
TFs
210 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FOMPIDRAFT_111082
Fomitopsis pinicola
FOMPIDRAFT_111082
N
0.536
M378DRAFT_124313
Amanita muscaria
M378DRAFT_124313
I
0.527
Moror_4724
Moniliophthora roreri
Moror_4724
I
0.500
FIBRA_06688
Fibroporia radiculosa
FIBRA_06688
I
0.489
SCLCIDRAFT_81131
Scleroderma citrinum
SCLCIDRAFT_81131
I
0.487
CNG02110
Cryptococcus neoformans
CNG02110
I
0.486
HYDPIDRAFT_113320
Hydnomerulius pinastri
HYDPIDRAFT_113320
I
0.485
PHACADRAFT_184752
Phanerochaete carnosa
PHACADRAFT_184752
N
0.484
fgeneshTM_pg.8_#_254
Tremella mesenterica
fgeneshTM_pg.8_#_254
I
0.484
POSPLDRAFT_92418
Postia placenta
POSPLDRAFT_92418
I
0.483
BN7_1833
Wickerhamomyces ciferrii
BN7_1833
I
0.481
CaO19.10341
Candida albicans
CaO19.10341
I
0.481
CD36_27640
Candida dubliniensis
CD36_27640
I
0.481
CTRG_00834
Candida tropicalis
CTRG_00834
I
0.481
G210_0578
Candida maltosa
G210_0578
I
0.481
PICST_67218
Scheffersomyces stipitis
PICST_67218
I
0.481
SPAPADRAFT_59824
Spathaspora passalidarum
SPAPADRAFT_59824
I
0.481
estExt_fgenesh1_pg.C_chr_3.10092
Pichia stipitis
estExt_fgenesh1_pg.C_chr_3.10092
I
0.481
L804_03658
Cryptococcus gattii
L804_03658
I
0.480
Kpol_1062p60
Vanderwaltozyma polyspora
Kpol_1062p60
I
0.478
fgenesh1_pg.C_scaffold_1000909
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_1000909
N
0.475
A1O1_00170
Capronia coronata
A1O1_00170
I
0.471
A1O3_02036
Capronia epimyces
A1O3_02036
I
0.471
A1O5_04108
Cladophialophora psammophila
A1O5_04108
I
0.471
A1O7_00275
Cladophialophora yegresii
A1O7_00275
I
0.471
G647_00298
Cladophialophora carrionii
G647_00298
I
0.471
HMPREF1120_05727
Exophiala dermatitidis
HMPREF1120_05727
I
0.471
PV04_01817
Capronia semiimmersa
PV04_01817
I
0.471
PV05_11046
Exophiala xenobiotica
PV05_11046
I
0.471
PV06_03562
Exophiala oligosperma
PV06_03562
I
0.471
PV07_10630
Cladophialophora immunda
PV07_10630
I
0.471
PV08_05977
Exophiala spinifera
PV08_05977
I
0.471
PV11_08420
Exophiala sideris
PV11_08420
I
0.471
Z517_08752
Fonsecaea pedrosoi
Z517_08752
I
0.471
Z518_08063
Rhinocladiella mackenziei
Z518_08063
I
0.471
Z519_03381
Cladophialophora bantiana
Z519_03381
I
0.471
Moror_16414
Moniliophthora roreri
Moror_16414
I
0.470
M413DRAFT_21819
Hebeloma cylindrosporum
M413DRAFT_21819
N
0.465
AACERI_AaceriADL331C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL331C
I
0.464
AGOS_ADL331C
Ashbya gossypii
AGOS_ADL331C
I
0.464
Ecym_3473
Eremothecium cymbalariae
Ecym_3473
I
0.464
CPAG_04451
Candida parapsilosis
CPAG_04451
I
0.463
GLOINDRAFT_55507
Rhizophagus irregularis
GLOINDRAFT_55507
N
0.463
K443DRAFT_250430
Laccaria amethystina
K443DRAFT_250430
I
0.463
NDAI_0E03570
Naumovozyma dairenensis
NDAI_0E03570
I
0.463
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.462
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.462
GLOTRDRAFT_127199
Gloeophyllum trabeum
GLOTRDRAFT_127199
N
0.461
Moror_2734
Moniliophthora roreri
Moror_2734
I
0.461
TDEL_0C04960
Torulaspora delbrueckii
TDEL_0C04960
I
0.461
PAXRUDRAFT_47613
Paxillus rubicundulus
PAXRUDRAFT_47613
I
0.460
SMU15015648
Schmidtea mediterranea
SMU15015648
I
0.460
DILT_0001026601
Diphyllobothrium latum
DILT_0001026601
I
0.460
SSLN_0000478001
Schistocephalus solidus
SSLN_0000478001
I
0.460
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.460
CIMG_12783
Coccidioides immitis
CIMG_12783
I
0.459
BDDG_02246
Blastomyces dermatitidis
BDDG_02246
I
0.459
CPC735_049570
Coccidioides posadasii
CPC735_049570
I
0.459
HCBG_03464
Histoplasma capsulatum
HCBG_03464
I
0.459
HCBG_03514
Histoplasma capsulatum
HCBG_03514
I
0.459
M408DRAFT_11440
Serendipita vermifera
M408DRAFT_11440
I
0.458
Moror_4096
Moniliophthora roreri
Moror_4096
I
0.457
AGABI2DRAFT_176060
Agaricus bisporus
AGABI2DRAFT_176060
I
0.456
CY34DRAFT_31998
Suillus luteus
CY34DRAFT_31998
I
0.453
M404DRAFT_159338
Pisolithus tinctorius
M404DRAFT_159338
I
0.453
PAAG_02636
Paracoccidioides sp lutzii
PAAG_02636
I
0.453
PABG_03121
Paracoccidioides brasiliensis
PABG_03121
I
0.453
PAXINDRAFT_17515
Paxillus involutus
PAXINDRAFT_17515
I
0.453
PISMIDRAFT_36586
Pisolithus microcarpus
PISMIDRAFT_36586
I
0.453
PLEOSDRAFT_1081807
Pleurotus ostreatus
PLEOSDRAFT_1081807
I
0.453
CMQ_1586
Grosmannia clavigera
CMQ_1586
I
0.452
GALMADRAFT_252018
Galerina marginata
GALMADRAFT_252018
N
0.452
MBM_00651
Marssonina brunnea
MBM_00651
I
0.452
PILCRDRAFT_274623
Piloderma croceum
PILCRDRAFT_274623
N
0.452
M378DRAFT_42891
Amanita muscaria
M378DRAFT_42891
I
0.451
CORT_0A01160
Candida orthopsilosis
CORT_0A01160
I
0.450
E5Q_00699
Mixia osmundae
E5Q_00699
I
0.449
TC007345
Tribolium castaneum
TC007345
I
0.449
fgenesh1_pg.C_scaffold_14000043
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_14000043
I
0.449
DEHA2E09460g
Debaryomyces hansenii
DEHA2E09460g
I
0.448
GNLVRS01_PISO0K11912g
Millerozyma farinosa
GNLVRS01_PISO0K11912g
I
0.448
GNLVRS01_PISO0L11913g
Millerozyma farinosa
GNLVRS01_PISO0L11913g
I
0.448
HETIRDRAFT_150286
Heterobasidion irregulare
HETIRDRAFT_150286
N
0.448
estExt_fgenesh2_pg.C_20645
Heterobasidion annosum
estExt_fgenesh2_pg.C_20645
N
0.448
BN946_scf184829.g43
Trametes cinnabarina
BN946_scf184829.g43
I
0.447
CERSUDRAFT_97591
Ceriporiopsis subvermispora
CERSUDRAFT_97591
N
0.447
CGGC5_2884
Colletotrichum gloeosporioides
CGGC5_2884
I
0.447
Cob_03892
Colletotrichum orbiculare
Cob_03892
I
0.447
GLRG_08663
Colletotrichum graminicola
GLRG_08663
I
0.447
MELLADRAFT_111305
Melampsora laricipopulina
MELLADRAFT_111305
I
0.447
BBA_05443
Beauveria bassiana
BBA_05443
I
0.446
CAGL0D05434g
Candida glabrata
CAGL0D05434g
I
0.446
CCM_04586
Cordyceps militaris
CCM_04586
I
0.446
CPUR_06949
Claviceps purpurea
CPUR_06949
I
0.446
OCS_05413
Ophiocordyceps sinensis
OCS_05413
I
0.446
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.446
SERLA73DRAFT_141654
Serpula lacrymans
SERLA73DRAFT_141654
I
0.446
UV8b_664
Ustilaginoidea virens
UV8b_664
I
0.446
VHEMI05549
Torrubiella hemipterigena
VHEMI05549
I
0.446
JAAARDRAFT_62109
Jaapia argillacea
JAAARDRAFT_62109
I
0.445
CC1G_03744
Coprinopsis cinerea
CC1G_03744
I
0.444
AGABI2DRAFT_46840
Agaricus bisporus
AGABI2DRAFT_46840
I
0.443
PV10_01892
Exophiala mesophila
PV10_01892
I
0.443
fgenesh1_pg.C_scaffold_7000434
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000434
I
0.443
GALMADRAFT_137502
Galerina marginata
GALMADRAFT_137502
N
0.442
GALMADRAFT_243779
Galerina marginata
GALMADRAFT_243779
N
0.442
CH063_08155
Colletotrichum higginsianum
CH063_08155
I
0.441
FFUJ_13386
Fusarium fujikuroi
FFUJ_13386
I
0.441
FGRRES_05151
Fusarium graminearum
FGRRES_05151
I
0.441
FOXG_07900
Fusarium oxysporum
FOXG_07900
I
0.441
FPSE_06551
Fusarium pseudograminearum
FPSE_06551
I
0.441
FVEG_04822
Fusarium verticillioides
FVEG_04822
I
0.441
JL09_g4172
Pichia kudriavzevii
JL09_g4172
I
0.441
K443DRAFT_4774
Laccaria amethystina
K443DRAFT_4774
I
0.441
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.441
LACBIDRAFT_300898
Laccaria bicolor
LACBIDRAFT_300898
I
0.441
LELG_00108
Lodderomyces elongisporus
LELG_00108
I
0.441
MAC_07229
Metarhizium acridum
MAC_07229
I
0.441
MAJ_07256
Metarhizium majus
MAJ_07256
I
0.441
MANI_017634
Metarhizium anisopliae
MANI_017634
I
0.441
MBR_05099
Metarhizium brunneum
MBR_05099
I
0.441
MGU_01572
Metarhizium guizhouense
MGU_01572
I
0.441
OIDMADRAFT_143853
Oidiodendron maius
OIDMADRAFT_143853
I
0.441
SMAR001063
Strigamia maritima
SMAR001063
I
0.441
X797_008883
Metarhizium robertsii
X797_008883
I
0.441
CANTEDRAFT_136140
Candida tenuis
CANTEDRAFT_136140
I
0.440
LACBIDRAFT_311738
Laccaria bicolor
LACBIDRAFT_311738
I
0.440
TBLA_0J01680
Tetrapisispora blattae
TBLA_0J01680
I
0.439
ECANG7_10853
Echinococcus canadensis
ECANG7_10853
I
0.439
HDID_0000236901
Hymenolepis diminuta
HDID_0000236901
I
0.439
HmN_000874900
Hymenolepis microstoma
HmN_000874900
I
0.439
HNAJ_0001105001
Hymenolepis nana
HNAJ_0001105001
I
0.439
TASK_0001001001
Taenia asiatica
TASK_0001001001
I
0.439
TsM_000188900
Taenia solium
TsM_000188900
I
0.439
TTAC_0000238201
Hydatigera taeniaeformis
TTAC_0000238201
I
0.439
GALMADRAFT_33159
Galerina marginata
GALMADRAFT_33159
I
0.438
HPODL_00225
Ogataea parapolymorpha
HPODL_00225
I
0.438
PFL1_03871
Pseudozyma flocculosa
PFL1_03871
I
0.436
GALMADRAFT_340474
Galerina marginata
GALMADRAFT_340474
I
0.435
GSTUM_00008644001
Tuber melanosporum
GSTUM_00008644001
I
0.435
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.435
PV09_07372
Verruconis gallopava
PV09_07372
I
0.435
MCOS_0000670801
Mesocestoides corti
MCOS_0000670801
I
0.435
scaffold4-EXSNAP2012.129
Pristionchus exspectatus
scaffold4-EXSNAP2012.129
I
0.435
L798_04766
Zootermopsis nevadensis
L798_04766
I
0.434
NechaG106035
Fusarium solani
NechaG106035
I
0.434
PHLGIDRAFT_340250
Phlebiopsis gigantea
PHLGIDRAFT_340250
I
0.434
THITE_2111506
Thielavia terrestris
THITE_2111506
N
0.434
fgeneshN1_pm.sca_3_chr4_2_0000013
Nectria haematococca
fgeneshN1_pm.sca_3_chr4_2_0000013
I
0.434
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.434
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
0.434
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
0.434
SAPIO_CDS2868
Scedosporium apiospermum
SAPIO_CDS2868
I
0.433
K443DRAFT_94014
Laccaria amethystina
K443DRAFT_94014
N
0.432
LACBIDRAFT_293340
Laccaria bicolor
LACBIDRAFT_293340
N
0.432
GLOINDRAFT_47695
Rhizophagus irregularis
GLOINDRAFT_47695
I
0.431
KAFR_0G02830
Kazachstania africana
KAFR_0G02830
I
0.431
NCAS_0E02010
Naumovozyma castellii
NCAS_0E02010
I
0.431
PAS_chr2-1_0017
Komagataella pastoris
PAS_chr2-1_0017
I
0.431
Scas_Contig614.4
Saccharomyces castellii
Scas_Contig614.4
I
0.431
XP_002490896.1
Pichia pastoris
XP_002490896.1
I
0.431
BOTBODRAFT_190207
Botryobasidium botryosum
BOTBODRAFT_190207
I
0.430
NV14822
Nasonia vitripennis
NV14822
I
0.430
DICSQDRAFT_40774
Dichomitus squalens
DICSQDRAFT_40774
I
0.429
GLOINDRAFT_30433
Rhizophagus irregularis
GLOINDRAFT_30433
N
0.429
KUCA_T00002521001
Kuraishia capsulata
KUCA_T00002521001
I
0.429
DACRYDRAFT_31804
Dacryopinax sp
DACRYDRAFT_31804
I
0.428
M422DRAFT_89750
Sphaerobolus stellatus
M422DRAFT_89750
I
0.428
PLEOSDRAFT_1016849
Pleurotus ostreatus
PLEOSDRAFT_1016849
N
0.427
V565_234600
Rhizoctonia solani
V565_234600
I
0.427
BAUCODRAFT_126300
Baudoinia compniacensis
BAUCODRAFT_126300
N
0.426
M378DRAFT_155487
Amanita muscaria
M378DRAFT_155487
I
0.426
YALI0_B02266g
Yarrowia lipolytica
YALI0_B02266g
I
0.426
ROX1
Saccharomyces cerevisiae
YPR065W
D
0.425
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.425
HmN_000208300
Hymenolepis microstoma
HmN_000208300
I
0.425
HNAJ_0000300301
Hymenolepis nana
HNAJ_0000300301
I
0.425
CC1G_13994
Coprinopsis cinerea
CC1G_13994
N
0.424
KAFR_0H00950
Kazachstania africana
KAFR_0H00950
I
0.424
NCAS_0A11120
Naumovozyma castellii
NCAS_0A11120
I
0.424
fgeneshMC_pg.8_#_228
Mucor circinelloides
fgeneshMC_pg.8_#_228
I
0.424
Scas_Contig667.28
Saccharomyces castellii
Scas_Contig667.28
I
0.424
GLOINDRAFT_46580
Rhizophagus irregularis
GLOINDRAFT_46580
I
0.423
M422DRAFT_111323
Sphaerobolus stellatus
M422DRAFT_111323
I
0.423
M422DRAFT_115248
Sphaerobolus stellatus
M422DRAFT_115248
I
0.423
ZBAI_06138
Zygosaccharomyces bailii
ZBAI_06138
I
0.421
ZYRO0D15312g
Zygosaccharomyces rouxii
ZYRO0D15312g
I
0.421
MAT2
Aspergillus nidulans
CADANIAG00005695
I
0.420
GALMADRAFT_240284
Galerina marginata
GALMADRAFT_240284
N
0.420
HETIRDRAFT_55525
Heterobasidion irregulare
HETIRDRAFT_55525
I
0.419
PHLGIDRAFT_44459
Phlebiopsis gigantea
PHLGIDRAFT_44459
I
0.419
PHSY_004115
Pseudozyma hubeiensis
PHSY_004115
I
0.419
PIIN_01973
Piriformospora indica
PIIN_01973
I
0.419
e_gw1.12.557.1
Heterobasidion annosum
e_gw1.12.557.1
I
0.419
CTHT_0011880
Chaetomium thermophilum
CTHT_0011880
N
0.418
GALMADRAFT_1187634
Galerina marginata
GALMADRAFT_1187634
N
0.418
SU7_3656
Saccharomyces arboricola
SU7_3656
I
0.418
22516_YPR065W
Saccharomyces mikatae
22516_YPR065W
I
0.418
23192_YPR065W
Saccharomyces paradoxus
23192_YPR065W
I
0.418
CaO19.2823
Candida albicans
CaO19.2823
I
0.417
GH23608
Drosophila grimshawi
FBgn0131065
I
0.417
GYMLUDRAFT_85036
Gymnopus luxurians
GYMLUDRAFT_85036
I
0.417
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.417
KNAG_0H00720
Kazachstania naganishii
KNAG_0H00720
I
0.417
PAXRUDRAFT_106123
Paxillus rubicundulus
PAXRUDRAFT_106123
I
0.417
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.417
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.417
PGUG_05440
Candida guilliermondii
PGUG_05440
I
0.415
PGUG_05440
Meyerozyma guilliermondii
PGUG_05440
I
0.415
UREG_05111
Uncinocarpus reesii
UREG_05111
I
0.415