JAAARDRAFT_33297 (Jaapia argillacea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 JAAARDRAFT_33297 T330715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN

NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.425 0.391
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS

SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.425 0.391
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN

NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.425 0.391
ROX1
M11346_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.425 0.391
ROX1
M11347_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.425 0.391
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ59727 Sox 165 235

Links

Other Sox family TFs
Other Jaapia argillacea TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL012501 Aedes aegypti AAEL012501 N
AALB010370 Anopheles albimanus AALB010370 N
AARA000663 Anopheles arabiensis AARA000663 N
AATE012391 Anopheles atroparvus AATE012391 N
ACHR006509 Anopheles christyi ACHR006509 N
ACUA005983 Anopheles culicifacies ACUA005983 N
ADIR002346 Anopheles dirus ADIR002346 N
AFUN002603 Anopheles funestus AFUN002603 N
AGAP011847 Anopheles gambiae AGAP011847 N
AMAM002685 Anopheles maculatus AMAM002685 N
AMEC011551 Anopheles melas AMEC011551 N
AMEM000663 Anopheles merus AMEM000663 N
AMIN008552 Anopheles minimus AMIN008552 N
AQUA009060 Anopheles quadriannulatus AQUA009060 N
ASIS019330 Anopheles sinensis ASIS019330 N
ASTEI05063 Anopheles stephensi ASTEI05063 N
CPIJ001450 Culex quinquefasciatus CPIJ001450 N