CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KAFR_0B06030
(
Kazachstania africana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
KAFR_0B06030
T330761_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HMO1
M11344_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$_HMO1_01
0.676
0.913
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF56899
Sox
98
171
PKKPLTVFFAYSAYVRQELRDARQKAGLPPLSSTEITQEISKKWKELSDNEKEKWKQAYNVELTHYQKAKQDYL
Links
Other
Sox
family TFs
Other
Kazachstania africana
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KNAG_0A04840
Kazachstania naganishii
KNAG_0A04840
I
0.734
SAKL0H14234g
Lachancea kluyveri
SAKL0H14234g
I
0.703
LALA0_S03e03444g
Lachancea lanzarotensis
LALA0_S03e03444g
I
0.676
SKUD_149803
Saccharomyces kudriavzevii
SKUD_149803
I
0.676
SU7_2586
Saccharomyces arboricola
SU7_2586
I
0.676
HMO1
Saccharomyces cerevisiae
YDR174W
D
0.676
3875_YDR174W
Saccharomyces mikatae
3875_YDR174W
I
0.676
4397_YDR174W
Saccharomyces paradoxus
4397_YDR174W
I
0.676
ZBAI_01315
Zygosaccharomyces bailii
ZBAI_01315
I
0.669
ZBAI_09581
Zygosaccharomyces bailii
ZBAI_09581
I
0.669
NDAI_0A01190
Naumovozyma dairenensis
NDAI_0A01190
I
0.663
NCAS_0B03190
Naumovozyma castellii
NCAS_0B03190
I
0.662
Scas_Contig682.13
Saccharomyces castellii
Scas_Contig682.13
I
0.662
TPHA_0C02460
Tetrapisispora phaffii
TPHA_0C02460
I
0.658
CAGL0E00737g
Candida glabrata
CAGL0E00737g
I
0.641
TDEL_0F04960
Torulaspora delbrueckii
TDEL_0F04960
I
0.640
AGOS_AGL141W
Ashbya gossypii
AGOS_AGL141W
I
0.634
Ecym_4194
Eremothecium cymbalariae
Ecym_4194
I
0.634
Kpol_1024p24
Vanderwaltozyma polyspora
Kpol_1024p24
I
0.634
TBLA_0A01170
Tetrapisispora blattae
TBLA_0A01170
I
0.633
ZYRO0C03718g
Zygosaccharomyces rouxii
ZYRO0C03718g
I
0.633
KLTH0F09020g
Lachancea thermotolerans
KLTH0F09020g
I
0.614
KLTH0F09020g
Kluyveromyces thermotolerans
KLTH0F09020g
I
0.614
BN7_2978
Wickerhamomyces ciferrii
BN7_2978
I
0.604
TBLA_0H01020
Tetrapisispora blattae
TBLA_0H01020
I
0.532