LotgiG105193 (Lottia gigantea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LotgiG105193 T330929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP105193 Sox 174 218

Links

Other Sox family TFs
Other Lottia gigantea TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG178344 Capitella teleta CapteG178344 N 0.612
CGI_10027770 Crassostrea gigas CGI_10027770 N 0.589
fgenesh2_pg.scaffold_5000103 Monosiga brevicollis fgenesh2_pg.scaffold_5000103 N 0.587
DAPPUDRAFT_306626 Daphnia pulex DAPPUDRAFT_306626 N 0.583
CAOG_02676 Capsaspora owczarzaki CAOG_02676 N 0.570
ACYPI006465 Acyrthosiphon pisum ACYPI006465 N 0.558
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.556
SPOG_02196 Schizosaccharomyces cryophilus SPOG_02196 N 0.547
LDEC009506 Leptinotarsa decemlineata LDEC009506 N 0.534
TC012902 Tribolium castaneum TC012902 N 0.531
ENSPMAG00000002918 Petromyzon marinus ENSPMAG00000002918 N 0.526
fgenesh1_pm.9__12 Bigelowiella natans fgenesh1_pm.9__12 N 0.519
V565_033960 Rhizoctonia solani V565_033960 N 0.518
SOCG_00309 Schizosaccharomyces octosporus SOCG_00309 N 0.514
L892_g25427 Steinernema scapterisci L892_g25427 N 0.514
ACEP25270 Atta cephalotes ACEP25270 N 0.505
XP_002163918.1 Hydra magnipapillata XP_002163918.1 I 0.497
AMSG_09450 Thecamonas trahens AMSG_09450 N 0.492
TriadG56122 Trichoplax adhaerens TriadG56122 N 0.488
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.486
fgenesh2_pg.C_Chr_03000283 Micromonas sp RCC299 fgenesh2_pg.C_Chr_03000283 N 0.483
Moror_16065 Moniliophthora roreri Moror_16065 I 0.478
ACEP23223 Atta cephalotes ACEP23223 N 0.471
Cflo_06149--XP_001122099.1_APIME Camponotus floridanus Cflo_06149--XP_001122099.1_APIME N 0.471
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.464
SPPG_03193 Spizellomyces punctatus SPPG_03193 N 0.448
SJAG_02223 Schizosaccharomyces japonicus SJAG_02223 N 0.444
OIDMADRAFT_54116 Oidiodendron maius OIDMADRAFT_54116 N 0.439
NV14872 Nasonia vitripennis NV14872 N 0.438
EFV51436 Trichinella spiralis EFV51436 N 0.432
D917_07703 Trichinella nativa D917_07703 N 0.432
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.430
Si007288m.g Setaria italica Si007288m.g I 0.426
CNG00580 Cryptococcus neoformans CNG00580 N 0.421
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.420
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.420
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.420
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.420
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.420
GLOINDRAFT_6870 Rhizophagus irregularis GLOINDRAFT_6870 N 0.415