CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LotgiG207546
(
Lottia gigantea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
LotgiG207546
T330950_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP207546
Sox
571
637
PKRPQSSYFLWLNEHREQIKEENPGISITDISRKAGEMWKKVDDKTKWDKLAEEAKKDYVKAMEEWN
Links
Other
Sox
family TFs
Other
Lottia gigantea
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB002303
Biomphalaria glabrata
BGLB002303
N
0.586
ssrp1a
Danio rerio
ENSDARG00000037397
I
0.562
ENSAMXG00000014826
Astyanax mexicanus
ENSAMXG00000014826
N
0.537
CGI_10024258
Crassostrea gigas
CGI_10024258
N
0.516
ENSCSAVG00000011755
Ciona savignyi
ENSCSAVG00000011755
N
0.510
Ocbimv22006454m.g
Octopus bimaculoides
Ocbimv22006454m.g
N
0.495
NEMVEDRAFT_v1g59568
Nematostella vectensis
NEMVEDRAFT_v1g59568
N
0.471
CapteG172235
Capitella teleta
CapteG172235
I
0.470
ISCW020032
Ixodes scapularis
ISCW020032
N
0.463
ASIS014507
Anopheles sinensis
ASIS014507
N
0.460
Aqu1.209664
Amphimedon queenslandica
Aqu1.209664
N
0.458
BGIBMGA005289
Bombyx mori
BGIBMGA005289
I
0.450
Sakowv30021656m.g
Saccoglossus kowalevskii
Sakowv30021656m.g
N
0.450
SMUV_0000358401
Syphacia muris
SMUV_0000358401
N
0.449
KGM_13852
Danaus plexippus
KGM_13852
I
0.447
ACEP16595
Atta cephalotes
ACEP16595
I
0.445
GI20867
Drosophila mojavensis
FBgn0143601
I
0.445
GJ20604
Drosophila virilis
FBgn0207743
I
0.445
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.445
MCINX001064
Melitaea cinxia
MCINX001064
I
0.443
GF11622
Drosophila ananassae
FBgn0088662
I
0.440
SVUK_0001398701
Strongylus vulgaris
SVUK_0001398701
N
0.439
ACAC_0000857301
Angiostrongylus cantonensis
ACAC_0000857301
N
0.438
ACOC_0000653601
Angiostrongylus costaricensis
ACOC_0000653601
N
0.438
AATE003884
Anopheles atroparvus
AATE003884
N
0.432
ADIR000496
Anopheles dirus
ADIR000496
N
0.430
AFAF013045
Anopheles farauti
AFAF013045
N
0.430
nAv.1.0.1.g09805
Acanthocheilonema viteae
nAv.1.0.1.g09805
N
0.430
BGIBMGA007393
Bombyx mori
BGIBMGA007393
N
0.428
ANCCAN_21637
Ancylostoma caninum
ANCCAN_21637
N
0.427
ANCCEY_10464
Ancylostoma ceylanicum
ANCCEY_10464
N
0.427
ANCDUO_11855
Ancylostoma duodenale
ANCDUO_11855
N
0.427
DICVIV_01337
Dictyocaulus viviparus
DICVIV_01337
N
0.427
HCOI00417600
Haemonchus contortus
HCOI00417600
N
0.427
HPLM_0000803901
Haemonchus placei
HPLM_0000803901
N
0.427
NBR_0001132501
Nippostrongylus brasiliensis
NBR_0001132501
N
0.427
NECAME_10840
Necator americanus
NECAME_10840
N
0.427
TELCIR_05217
Teladorsagia circumcincta
TELCIR_05217
N
0.427
TELCIR_22690
Teladorsagia circumcincta
TELCIR_22690
N
0.427
AGAP012335
Anopheles gambiae
AGAP012335
N
0.425
AARA003414
Anopheles arabiensis
AARA003414
N
0.425
ACOM026234
Anopheles coluzzii
ACOM026234
N
0.425
AMEC001570
Anopheles melas
AMEC001570
N
0.425
AQUA002991
Anopheles quadriannulatus
AQUA002991
N
0.425
HPBE_0002310801
Heligmosomoides bakeri
HPBE_0002310801
N
0.421
GH20784
Drosophila grimshawi
FBgn0128247
I
0.418
MDOA014797
Musca domestica
MDOA014797
I
0.418
ANCCAN_19939
Ancylostoma caninum
ANCCAN_19939
N
0.417
GD20959
Drosophila simulans
FBgn0192415
I
0.416
CLEC003860
Cimex lectularius
CLEC003860
I
0.416
PPAI002522
Phlebotomus papatasi
PPAI002522
I
0.415