maker-piw_contig_2474-fgenesh-gene-0.2 (Pythium iwayamai)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-piw_contig_2474-fgenesh-gene-0.2 T331155_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPW00000024035 Sox 34 103
EPrPW00000024035 Sox 120 188

Links

Other Sox family TFs
Other Pythium iwayamai TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
maker-pir_contig_878-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_878-fgenesh-gene-0.5 N 0.735
SPRG_08822 Saprolegnia parasitica SPRG_08822 N 0.722
Phyra84677 Phytophthora ramorum Phyra84677 N 0.719
estExt_fgenesh1_kg.C_50989 Phytophthora capsici estExt_fgenesh1_kg.C_50989 N 0.716
F443_13786 Phytophthora parasitica F443_13786 N 0.714
fgenesh_scip_prom.46568.3800 Phytophthora kernoviae fgenesh_scip_prom.46568.3800 N 0.714
HpaG804287 Hyaloperonospora arabidopsidis HpaG804287 N 0.714
Physo142322 Phytophthora sojae Physo142322 N 0.714
PYU1_G009116 Pythium ultimum PYU1_G009116 N 0.714
ALNC14_018350 Albugo laibachii ALNC14_018350 N 0.693
fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 Pythium aphanidermatum fgenesh_masked-pag1_scaffold_35-abinit-gene-0.129 N 0.672
maker-pve_contig_787-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_787-fgenesh-gene-0.0 N 0.671
maker-par_contig_1203-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_1203-snap-gene-0.8 N 0.656
estExt_Genewise1Plus.C_21097 Fragilariopsis cylindrus estExt_Genewise1Plus.C_21097 N 0.418