NEMVEDRAFT_v1g105457 (Nematostella vectensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 NEMVEDRAFT_v1g105457 T331460_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.598 0.609
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO41032 Sox 15 83

Links

Other Sox family TFs
Other Nematostella vectensis TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011684 Calypte anna Aan_R011684 I 0.598
Aan_R011791 Calypte anna Aan_R011791 I 0.582
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.440
ADIR009189 Anopheles dirus ADIR009189 N 0.438
AEPI008671 Anopheles epiroticus AEPI008671 N 0.440
AFAF015452 Anopheles farauti AFAF015452 N 0.419
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.582
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.598
AFUN010952 Anopheles funestus AFUN010952 N 0.417
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.598
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.582
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.460
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.582
CapteG155070 Capitella teleta CapteG155070 I 0.537
CapteG191691 Capitella teleta CapteG191691 I 0.446
CGI_10011619 Crassostrea gigas CGI_10011619 N 0.427
CGI_10028818 Crassostrea gigas CGI_10028818 I 0.480
CLEC002862 Cimex lectularius CLEC002862 I 0.505
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.598
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.442
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.582
DAPPUDRAFT_189566 Daphnia pulex DAPPUDRAFT_189566 N 0.441
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.587
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.598
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.590
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.552
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.626
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.589
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.598
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.582
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.598
ENSCING00000018888 Ciona intestinalis ENSCING00000018888 N 0.451
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.538
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.598
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.590
ENSCSAVG00000001086 Ciona savignyi ENSCSAVG00000001086 N 0.430
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.591
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.582
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.598
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.582
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.587
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.622
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.663
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.553
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.536
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.655
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.598
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.590
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.456
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.456
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.598
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.590
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.590
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.590
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.571
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.598
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.587
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.626
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.590
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.590
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.598
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.590
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.587
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.626
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.590
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.598
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.598
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.582
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.598
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.590
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.590
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.590
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.598
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.590
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.626
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.587
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.507
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.684
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.684
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.507
GB41600 Apis mellifera GB41600 I 0.484
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.551
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.598
HelroG189739 Helobdella robusta HelroG189739 N 0.454
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.507
HMEL017569 Heliconius melpomene HMEL017569 I 0.465
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.582
HMG20A Bos taurus ENSBTAG00000020441 I 0.590
HMG20A Canis familiaris ENSCAFG00000018061 I 0.590
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.590
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.590
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.590
hmg20a Danio rerio ENSDARG00000031198 I 0.648
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.590
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.590
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.590
HMG20A Echinops telfairi ENSETEG00000015812 I 0.590
HMG20A Felis catus ENSFCAG00000022539 I 0.590
HMG20A Homo sapiens ENSG00000140382 I 0.590
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.626
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.590
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.590
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.582
HMG20A Microcebus murinus ENSMICG00000011025 I 0.590
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.590
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.590
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.590
Hmg20a Mus musculus ENSMUSG00000032329 I 0.590
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.590
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.590
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.590
hmg20a Oryzias latipes ENSORLG00000001794 I 0.626
HMG20A Procavia capensis ENSPCAG00000013879 I 0.590
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.590
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.590
HMG20A Sorex araneus ENSSARG00000012609 I 0.550
HMG20A Sus scrofa ENSSSCG00000001871 I 0.590
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.590
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.582
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.626
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.626
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.590
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.590
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.636
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.636
HMG20B Canis familiaris ENSCAFG00000019215 I 0.598
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.589
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.598
hmg20b Danio rerio ENSDARG00000042045 I 0.589
HMG20B Felis catus ENSFCAG00000026167 I 0.598
HMG20B Homo sapiens ENSG00000064961 I 0.598
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.587
HMG20B Gallus gallus ENSGALG00000027838 I 0.598
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.598
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.598
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.598
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.598
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.598
Hmg20b Mus musculus ENSMUSG00000020232 D 0.598
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.598
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.598
hmg20b Oryzias latipes ENSORLG00000004640 I 0.587
HMG20B Procavia capensis ENSPCAG00000010772 I 0.598
HMG20B Pteropus vampyrus ENSPVAG00000004300 I 0.417
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.598
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.598
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.587
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.598
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.604
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.604
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.604
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.441
KGM_20768 Danaus plexippus KGM_20768 N 0.419
L798_15457 Zootermopsis nevadensis L798_15457 I 0.527
LDEC005234 Leptinotarsa decemlineata LDEC005234 N 0.433
LDEC010438 Leptinotarsa decemlineata LDEC010438 I 0.439
LotgiG196090 Lottia gigantea LotgiG196090 I 0.534
LotgiG231408 Lottia gigantea LotgiG231408 I 0.482
MCINX003064 Melitaea cinxia MCINX003064 I 0.460
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.590
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.598
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.635
NV11068 Nasonia vitripennis NV11068 I 0.515
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.560
PHUM514030 Pediculus humanus PHUM514030 N 0.430
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.582
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.598
RPRC008043 Rhodnius prolixus RPRC008043 I 0.470
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I 0.535
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.651
SMAR000790 Strigamia maritima SMAR000790 I 0.577
SMAR002604 Strigamia maritima SMAR002604 I 0.551
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.620
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.620
Tal_R006697 Tyto alba Tal_R006697 I 0.582
TC009230 Tribolium castaneum TC009230 N 0.431
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.644
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.615
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.615
YQE_04289 Dendroctonus ponderosae YQE_04289 N 0.466