CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G20340
(
Oryza nivara
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ONIVA04G20340
T331648_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G20340.1
Sox
25
81
PKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQYGGKKPD
ONIVA04G20340.2
Sox
25
81
PKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQYGGKKPD
Links
Other
Sox
family TFs
Other
Oryza nivara
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GK14726
Drosophila willistoni
FBgn0216731
N
MDOA003490
Musca domestica
MDOA003490
N
ASIS005067
Anopheles sinensis
ASIS005067
N
AMEC014816
Anopheles melas
AMEC014816
N
AFAF001085
Anopheles farauti
AFAF001085
N
ACUA015989
Anopheles culicifacies
ACUA015989
N
AATE000231
Anopheles atroparvus
AATE000231
N
LCUP005628
Lucilia cuprina
LCUP005628
N
Kr-h1
Drosophila melanogaster
FBgn0266450
N
GE13637
Drosophila yakuba
FBgn0231296
N
ADAC002981
Anopheles darlingi
ADAC002981
N
GJ15822
Drosophila virilis
FBgn0203009
N
GD23387
Drosophila simulans
FBgn0194772
N
GM18603
Drosophila sechellia
FBgn0173509
N
GI17314
Drosophila mojavensis
FBgn0140058
N
GH10804
Drosophila grimshawi
FBgn0118285
N
GG10387
Drosophila erecta
FBgn0102696
N
GF14504
Drosophila ananassae
FBgn0091531
N
GA15080
Drosophila pseudoobscura
FBgn0075105
N