CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGTG_13945
(
Puccinia graminis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PGTG_13945
T331872_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFP87574
Sox
221
294
PKRPASAYILFQNAVRQEMRAANPTADYKELARQIGDRWKNLSEEAKRPWSEAGKLAMNSWNIQNKEYKTSHPE
Links
Other
Sox
family TFs
Other
Puccinia graminis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTTG_03136
Puccinia triticina
PTTG_03136
N
0.741
MELLADRAFT_71918
Melampsora laricipopulina
MELLADRAFT_71918
N
0.707
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.430
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.418
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.418
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.418
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.418
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.418
EPUS_09213
Endocarpon pusillum
EPUS_09213
I
0.415