CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PODANS_1_13940
(
Podospora anserina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PODANS_1_13940
T332106_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY
RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.682
0.739
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.498
0.319
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.498
0.319
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.489
0.377
ste11
M11343_2.00
Schizosaccharomyces pombe
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.489
0.377
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP65005
Sox
198
266
VKRPMNAFMLYRKAYQQRAKEWASQHNHQIVSRVCGSSWPLEPEHIRQQFKAWADLERDNHQKAHPNYK
Links
Other
Sox
family TFs
Other
Podospora anserina
TFs
354 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000007074
Ailuropoda melanoleuca
ENSAMEG00000007074
I
Alligator_sinensis_CCG014139.1
Alligator sinensis
Alligator_sinensis_CCG014139.1
N
ENSAPLG00000003934
Anas platyrhynchos
ENSAPLG00000003934
I
Afo_R009044
Aptenodytes forsteri
Afo_R009044
I
ENSP00000266269-D1
Bos grunniens
ENSP00000266269-D1
I
PATZ1
Bos taurus
ENSBTAG00000005478
I
Brh_R010628
Buceros rhinoceros
Brh_R010628
I
PATZ1
Callithrix jacchus
ENSCJAG00000010978
N
Aan_R008287
Calypte anna
Aan_R008287
I
PATZ1
Canis familiaris
ENSCAFG00000013087
I
PATZ1
Cavia porcellus
ENSCPOG00000010787
I
Cmyd_10005165
Chelonia mydas
Cmyd_10005165
N
ENSCSAG00000008746
Chlorocebus sabaeus
ENSCSAG00000008746
N
PATZ1
Dasypus novemcinctus
ENSDNOG00000003183
I
PATZ1
Equus caballus
ENSECAG00000025030
N
PATZ1
Felis catus
ENSFCAG00000030253
N
ENSFALG00000007450
Ficedula albicollis
ENSFALG00000007450
I
PATZ1
Gallus gallus
ENSGALG00000006934
I
Gfo_R010882
Geospiza fortis
Gfo_R010882
I
PATZ1
Gorilla gorilla
ENSGGOG00000017171
I
PATZ1
Homo sapiens
ENSG00000100105
D
ENSSTOG00000020707
Ictidomys tridecemlineatus
ENSSTOG00000020707
I
ENSLACG00000016839
Latimeria chalumnae
ENSLACG00000016839
I
PATZ1
Loxodonta africana
ENSLAFG00000002317
I
ENSP00000266269
Macaca fascicularis
ENSP00000266269
I
ENSMEUG00000016293
Macropus eugenii
ENSMEUG00000016293
I
PATZ1
Meleagris gallopavo
ENSMGAG00000008439
I
PATZ1
Microcebus murinus
ENSMICG00000005430
I
ENSMPUG00000012814
Mustela putorius furo
ENSMPUG00000012814
N
Patz1
Mus musculus
ENSMUSG00000020453
I
Myotis_brandtii_PATZ1_10027570
Myotis brandtii
Myotis_brandtii_PATZ1_10027570
I
PATZ1
Myotis lucifugus
ENSMLUG00000009942
I
ENSNLEG00000004385
Nomascus leucogenys
ENSNLEG00000004385
I
PATZ1
Ochotona princeps
ENSOPRG00000002286
N
Ogr03452
Ophisaurus gracilis
Ogr03452
N
PATZ1
Ornithorhynchus anatinus
ENSOANG00000014654
I
PATZ1
Oryctolagus cuniculus
ENSOCUG00000002323
N
PATZ1
Otolemur garnettii
ENSOGAG00000027905
I
ENSOARG00000010061
Ovis aries
ENSOARG00000010061
N
PATZ1
Pan troglodytes
ENSPTRG00000014268
I
ENSPSIG00000016553
Pelodiscus sinensis
ENSPSIG00000016553
I
ENSPSIG00000011562
Pelodiscus sinensis
ENSPSIG00000011562
I
Pvit_03702
Pogona vitticeps
Pvit_03702
I
ENSPPYG00000011732
Pongo abelii
ENSPPYG00000011732
I
PATZ1
Pteropus vampyrus
ENSPVAG00000001749
I
Patz1
Rattus norvegicus
ENSRNOG00000018709
N
PATZ1
Sus scrofa
ENSSSCG00000010027
N
PATZ1
Taeniopygia guttata
ENSTGUG00000009749
N
PATZ1
Tursiops truncatus
ENSTTRG00000010279
I
Tal_R008892
Tyto alba
Tal_R008892
I