Sb06g025440 (Sorghum bicolor)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Sb06g025440 T332419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb06g025440.1 Sox 19 91
Sb06g025440.2 Sox 19 90

Links

Other Sox family TFs
Other Sorghum bicolor TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G145968 Zea mays GRMZM2G145968 N 0.708
Pavir.Ga01019 Panicum virgatum Pavir.Ga01019 N 0.623
Pavir.Gb00881 Panicum virgatum Pavir.Gb00881 N 0.614
Traes_2AL_020BC1DF2 Triticum aestivum Traes_2AL_020BC1DF2 N 0.529
Traes_2BL_3EF023231 Triticum aestivum Traes_2BL_3EF023231 N 0.529
MLOC_57354 Hordeum vulgare MLOC_57354 N 0.499
Si011290m.g Setaria italica Si011290m.g N 0.467
BRADI5G18460 Brachypodium distachyon BRADI5G18460 N 0.448
SELMODRAFT_175895 Selaginella moellendorffii SELMODRAFT_175895 I 0.439
SELMODRAFT_38818 Selaginella moellendorffii SELMODRAFT_38818 I 0.439
F775_06533 Aegilops tauschii F775_06533 N 0.437
Traes_2DL_6CACFD720 Triticum aestivum Traes_2DL_6CACFD720 N 0.437
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I 0.424
GSMUA_Achr4G25860_001 Musa acuminata GSMUA_Achr4G25860_001 I 0.423
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.423
Aquca_035_00040 Aquilegia coerulea Aquca_035_00040 I 0.421
GSMUA_Achr2G11060_001 Musa acuminata GSMUA_Achr2G11060_001 I 0.420
GSMUA_Achr5G11630_001 Musa acuminata GSMUA_Achr5G11630_001 I 0.420
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.417
LPERR04G17840 Leersia perrieri LPERR04G17840 N 0.417
OB04G28810 Oryza brachyantha OB04G28810 N 0.417
OBART04G21800 Oryza barthii OBART04G21800 N 0.417
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.417
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.417
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.417
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.417
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.417
OS04G0564600 Oryza sativa OS04G0564600 N 0.417