CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCLCIDRAFT_120630
(
Scleroderma citrinum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SCLCIDRAFT_120630
T332479_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bbx
M00196_2.00
Mus musculus
TTCATTGA
TCAATGAA
PBM
Badis et al.(2009)
Bbx_3753
0.495
0.333
BBX
M05763_2.00
Homo sapiens
TGAWCDNYGWTCA
TGAWCRNHGWTCA
SELEX
Yin et al.(2017)
BBX_eDBD_HT-SELEX
0.461
0.319
BBX
M05764_2.00
Homo sapiens
TGAACDNYGTTCA
TGAACRNHGTTCA
SELEX
Yin et al.(2017)
BBX_eDBD_Methyl-HT-SELEX
0.461
0.319
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM61945
Sox
100
169
VPRPRNAFMLFRSAFAAAQKISTNIEHDNRHITRIIAHCWNRLSEADKQVWRDKAAAEKAQHTAKYPNYR
Links
Other
Sox
family TFs
Other
Scleroderma citrinum
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CY34DRAFT_798812
Suillus luteus
CY34DRAFT_798812
I
0.706
PAXRUDRAFT_130978
Paxillus rubicundulus
PAXRUDRAFT_130978
I
0.694
M404DRAFT_998162
Pisolithus tinctorius
M404DRAFT_998162
I
0.634
PISMIDRAFT_61363
Pisolithus microcarpus
PISMIDRAFT_61363
I
0.634
Sakowv30039572m.g
Saccoglossus kowalevskii
Sakowv30039572m.g
I
0.497
Bbx
Mus musculus
ENSMUSG00000022641
D
0.495
Bbx
Rattus norvegicus
ENSRNOG00000001971
I
0.495
bbx
Takifugu rubripes
ENSTRUG00000003077
I
0.495
POSPLDRAFT_104619
Postia placenta
POSPLDRAFT_104619
I
0.494
POSPLDRAFT_98507
Postia placenta
POSPLDRAFT_98507
I
0.494
PV10_01892
Exophiala mesophila
PV10_01892
I
0.483
AGABI2DRAFT_176060
Agaricus bisporus
AGABI2DRAFT_176060
I
0.475
BDDG_02246
Blastomyces dermatitidis
BDDG_02246
I
0.472
CMQ_1586
Grosmannia clavigera
CMQ_1586
I
0.472
HCBG_03464
Histoplasma capsulatum
HCBG_03464
I
0.472
HCBG_03514
Histoplasma capsulatum
HCBG_03514
I
0.472
M378DRAFT_155487
Amanita muscaria
M378DRAFT_155487
I
0.471
GALMADRAFT_340474
Galerina marginata
GALMADRAFT_340474
I
0.469
ASTEI00827
Anopheles stephensi
ASTEI00827
I
0.467
CIMG_12783
Coccidioides immitis
CIMG_12783
I
0.466
CPC735_049570
Coccidioides posadasii
CPC735_049570
I
0.466
LotgiG89909
Lottia gigantea
LotgiG89909
I
0.463
BBX
Anolis carolinensis
ENSACAG00000006532
I
0.461
ENSAMEG00000002574
Ailuropoda melanoleuca
ENSAMEG00000002574
I
0.461
ENSAMXG00000017656
Astyanax mexicanus
ENSAMXG00000017656
I
0.461
ENSAPLG00000005336
Anas platyrhynchos
ENSAPLG00000005336
I
0.461
BBX
Bos taurus
ENSBTAG00000006893
I
0.461
BBX
Canis familiaris
ENSCAFG00000009867
I
0.461
BBX
Callithrix jacchus
ENSCJAG00000004843
I
0.461
BBX
Cavia porcellus
ENSCPOG00000003575
I
0.461
ENSCSAG00000006313
Chlorocebus sabaeus
ENSCSAG00000006313
I
0.461
bbx
Danio rerio
ENSDARG00000012699
I
0.461
BBX
Dasypus novemcinctus
ENSDNOG00000013923
I
0.461
Bbx
Dipodomys ordii
ENSDORG00000008169
I
0.461
BBX
Equus caballus
ENSECAG00000023413
I
0.461
BBX
Erinaceus europaeus
ENSEEUG00000014092
I
0.461
BBX
Echinops telfairi
ENSETEG00000005122
I
0.461
ENSFALG00000006478
Ficedula albicollis
ENSFALG00000006478
I
0.461
BBX
Felis catus
ENSFCAG00000007296
I
0.461
BBX
Homo sapiens
ENSG00000114439
D
0.461
bbx
Gasterosteus aculeatus
ENSGACG00000020111
I
0.461
BBX
Gorilla gorilla
ENSGGOG00000028441
I
0.461
ENSGMOG00000015829
Gadus morhua
ENSGMOG00000015829
I
0.461
ENSLACG00000001134
Latimeria chalumnae
ENSLACG00000001134
I
0.461
BBX
Loxodonta africana
ENSLAFG00000006362
I
0.461
BBX
Meleagris gallopavo
ENSMGAG00000014384
I
0.461
BBX
Myotis lucifugus
ENSMLUG00000007351
I
0.461
BBX
Macaca mulatta
ENSMMUG00000008787
I
0.461
BBX
Monodelphis domestica
ENSMODG00000001748
I
0.461
ENSMPUG00000009907
Mustela putorius furo
ENSMPUG00000009907
I
0.461
ENSNLEG00000003524
Nomascus leucogenys
ENSNLEG00000003524
I
0.461
BBX
Ornithorhynchus anatinus
ENSOANG00000007497
I
0.461
ENSOARG00000018829
Ovis aries
ENSOARG00000018829
I
0.461
BBX
Oryctolagus cuniculus
ENSOCUG00000001686
I
0.461
BBX
Otolemur garnettii
ENSOGAG00000008056
I
0.461
ENSONIG00000004775
Oreochromis niloticus
ENSONIG00000004775
I
0.461
BBX
Ochotona princeps
ENSOPRG00000017013
I
0.461
bbx
Oryzias latipes
ENSORLG00000005486
I
0.461
ENSPANG00000018335
Papio anubis
ENSPANG00000018335
I
0.461
BBX
Procavia capensis
ENSPCAG00000013443
I
0.461
ENSPFOG00000000813
Poecilia formosa
ENSPFOG00000000813
I
0.461
ENSPPYG00000013578
Pongo abelii
ENSPPYG00000013578
I
0.461
ENSPSIG00000015872
Pelodiscus sinensis
ENSPSIG00000015872
I
0.461
BBX
Pan troglodytes
ENSPTRG00000015187
I
0.461
BBX
Pteropus vampyrus
ENSPVAG00000010534
I
0.461
ENSSHAG00000003009
Sarcophilus harrisii
ENSSHAG00000003009
I
0.461
BBX
Sus scrofa
ENSSSCG00000011943
I
0.461
ENSTGUG00000013611
Taeniopygia guttata
ENSTGUG00000013611
I
0.461
bbx
Tetraodon nigroviridis
ENSTNIG00000008596
I
0.461
ENSTSYG00000000857
Tarsius syrichta
ENSTSYG00000000857
I
0.461
BBX
Tursiops truncatus
ENSTTRG00000013182
I
0.461
BBX
Vicugna pacos
ENSVPAG00000007818
I
0.461
ENSXMAG00000009457
Xiphophorus maculatus
ENSXMAG00000009457
I
0.461
Aan_R014485
Calypte anna
Aan_R014485
I
0.461
Afo_R006638
Aptenodytes forsteri
Afo_R006638
I
0.461
Alligator_sinensis_CCG019960.1
Alligator sinensis
Alligator_sinensis_CCG019960.1
I
0.461
Brh_R008020
Buceros rhinoceros
Brh_R008020
I
0.461
Cmyd_10015225
Chelonia mydas
Cmyd_10015225
I
0.461
ENSBTAP00000009058-D1
Bos grunniens
ENSBTAP00000009058-D1
I
0.461
ENSMMUP00000011518
Macaca fascicularis
ENSMMUP00000011518
I
0.461
Gfo_R002593
Geospiza fortis
Gfo_R002593
I
0.461
Myotis_brandtii_BBX_10016000
Myotis brandtii
Myotis_brandtii_BBX_10016000
I
0.461
Ogr11041
Ophisaurus gracilis
Ogr11041
I
0.461
Pvit_02469
Pogona vitticeps
Pvit_02469
I
0.461
Tal_R013114
Tyto alba
Tal_R013114
I
0.461
bbx.L
Xenopus laevis
XB-GENE-981431
I
0.461
XP_002932333
Xenopus tropicalis
XP_002932333
I
0.461
CC1G_03744
Coprinopsis cinerea
CC1G_03744
I
0.459
CGI_10018417
Crassostrea gigas
CGI_10018417
I
0.458
CapteG223458
Capitella teleta
CapteG223458
I
0.457
CapteG39110
Capitella teleta
CapteG39110
I
0.457
TSTA_008530
Talaromyces stipitatus
TSTA_008530
I
0.457
AUEXF2481DRAFT_37338
Aureobasidium subglaciale
AUEXF2481DRAFT_37338
I
0.456
M407DRAFT_45884
Tulasnella calospora
M407DRAFT_45884
I
0.456
GSTUM_00008644001
Tuber melanosporum
GSTUM_00008644001
I
0.455
A1O1_00170
Capronia coronata
A1O1_00170
I
0.454
A1O3_02036
Capronia epimyces
A1O3_02036
I
0.454
A1O5_04108
Cladophialophora psammophila
A1O5_04108
I
0.454
G647_00298
Cladophialophora carrionii
G647_00298
I
0.454
M437DRAFT_74676
Aureobasidium melanogenum
M437DRAFT_74676
I
0.454
M438DRAFT_346080
Aureobasidium pullulans
M438DRAFT_346080
I
0.454
PV04_01817
Capronia semiimmersa
PV04_01817
I
0.454
PV07_10630
Cladophialophora immunda
PV07_10630
I
0.454
Z518_08063
Rhinocladiella mackenziei
Z518_08063
I
0.454
Z519_03381
Cladophialophora bantiana
Z519_03381
I
0.454
Moror_11417
Moniliophthora roreri
Moror_11417
N
0.453
CBG00068
Caenorhabditis briggsae
CBG00068
I
0.452
ASTEI11145
Anopheles stephensi
ASTEI11145
I
0.449
A1O7_00275
Cladophialophora yegresii
A1O7_00275
I
0.448
Z517_08752
Fonsecaea pedrosoi
Z517_08752
I
0.448
PABG_03121
Paracoccidioides brasiliensis
PABG_03121
I
0.447
AATE006341
Anopheles atroparvus
AATE006341
I
0.445
BGLB009093
Biomphalaria glabrata
BGLB009093
I
0.444
PAAG_02636
Paracoccidioides sp lutzii
PAAG_02636
I
0.441
TDEL_0C04960
Torulaspora delbrueckii
TDEL_0C04960
I
0.441
UREG_05111
Uncinocarpus reesii
UREG_05111
I
0.441
ZBAI_00827
Zygosaccharomyces bailii
ZBAI_00827
I
0.440
ZBAI_06138
Zygosaccharomyces bailii
ZBAI_06138
I
0.440
ZYRO0D15312g
Zygosaccharomyces rouxii
ZYRO0D15312g
I
0.440
PABG_05778
Paracoccidioides brasiliensis
PABG_05778
I
0.437
AMIN000258
Anopheles minimus
AMIN000258
I
0.437
NV14822
Nasonia vitripennis
NV14822
I
0.435
LEMA_P042400.1
Leptosphaeria maculans
LEMA_P042400.1
I
0.433
NechaG106035
Fusarium solani
NechaG106035
I
0.433
PCH_Pc22g06930
Penicillium rubens
PCH_Pc22g06930
I
0.433
PITC_068990
Penicillium italicum
PITC_068990
I
0.433
SPAPADRAFT_59824
Spathaspora passalidarum
SPAPADRAFT_59824
I
0.433
U727_00431010161
Penicillium solitum
U727_00431010161
I
0.433
fgeneshN1_pm.sca_3_chr4_2_0000013
Nectria haematococca
fgeneshN1_pm.sca_3_chr4_2_0000013
I
0.433
Pc22g06930
Penicillium chrysogenum
Pc22g06930
I
0.433
CC1G_13679
Coprinopsis cinerea
CC1G_13679
I
0.432
MCYG_06419
Microsporum canis
MCYG_06419
I
0.431
H101_01550
Trichophyton interdigitale
H101_01550
I
0.431
MCYG_06419
Arthroderma otae
MCYG_06419
I
0.431
MGYG_06874
Microsporum gypseum
MGYG_06874
I
0.431
TESG_05246
Trichophyton tonsurans
TESG_05246
I
0.431
GSTUM_00001090001
Tuber melanosporum
GSTUM_00001090001
I
0.430
PTT_07342
Pyrenophora teres
PTT_07342
I
0.430
AMAM016153
Anopheles maculatus
AMAM016153
I
0.429
SNOG_07773
Stagonospora nodorum
SNOG_07773
I
0.427
CHGG_08188
Chaetomium globosum
CHGG_08188
I
0.427
CPUR_06949
Claviceps purpurea
CPUR_06949
I
0.427
CTHT_0006830
Chaetomium thermophilum
CTHT_0006830
I
0.427
GMDG_03362
Pseudogymnoascus destructans
GMDG_03362
I
0.427
MAC_07229
Metarhizium acridum
MAC_07229
I
0.427
MAJ_07256
Metarhizium majus
MAJ_07256
I
0.427
MANI_017634
Metarhizium anisopliae
MANI_017634
I
0.427
MBR_05099
Metarhizium brunneum
MBR_05099
I
0.427
MGU_01572
Metarhizium guizhouense
MGU_01572
I
0.427
PaG_02426
Pseudozyma aphidis
PaG_02426
N
0.427
PDE_06698
Penicillium oxalicum
PDE_06698
I
0.427
PTRG_06171
Pyrenophora triticirepentis
PTRG_06171
I
0.427
V499_06181
Pseudogymnoascus pannorum
V499_06181
I
0.427
X797_008883
Metarhizium robertsii
X797_008883
I
0.427
ACLA_049990
Aspergillus clavatus
CADACLAG00004890
I
0.426
CADAFLAG00002060
Aspergillus flavus
CADAFLAG00002060
I
0.426
AFUA_4G10820
Aspergillus fumigatus
CADAFUAG00008327
I
0.426
CADANGAG00004297
Aspergillus niger
CADANGAG00004297
I
0.426
ATEG_03987
Aspergillus terreus
CADATEAG00009198
I
0.426
NFIA_105270
Neosartorya fischeri
CADNFIAG00010303
I
0.426
EURHEDRAFT_373724
Aspergillus ruber
EURHEDRAFT_373724
I
0.426
FFUJ_13386
Fusarium fujikuroi
FFUJ_13386
I
0.426
FGRRES_05151
Fusarium graminearum
FGRRES_05151
I
0.426
FOXG_07900
Fusarium oxysporum
FOXG_07900
I
0.426
FPSE_06551
Fusarium pseudograminearum
FPSE_06551
I
0.426
FVEG_04822
Fusarium verticillioides
FVEG_04822
I
0.426
MYCFIDRAFT_86029
Pseudocercospora fijiensis
MYCFIDRAFT_86029
I
0.426
OCS_05413
Ophiocordyceps sinensis
OCS_05413
I
0.426
OIDMADRAFT_143853
Oidiodendron maius
OIDMADRAFT_143853
I
0.426
PMAA_003200
Talaromyces marneffei
PMAA_003200
I
0.426
PVAR5_3110
Byssochlamys spectabilis
PVAR5_3110
I
0.426
SEPMUDRAFT_153151
Sphaerulina musiva
SEPMUDRAFT_153151
I
0.426
TSTA_077960
Talaromyces stipitatus
TSTA_077960
I
0.426
estExt_fgenesh1_pg.C_10913
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10913
I
0.426
fgenesh1_pm.00609_#_235
Aspergillus carbonarius
fgenesh1_pm.00609_#_235
I
0.426
PMAA_003200
Penicillium marneffei
PMAA_003200
I
0.426
D915_09544
Fasciola hepatica
D915_09544
I
0.426
ECPE_0001539401
Echinostoma caproni
ECPE_0001539401
I
0.426
PNEG_02275
Pneumocystis murina
PNEG_02275
I
0.425
PredSwiss_EST753.1
Pneumocystis carinii
PredSwiss_EST753.1
I
0.425
BN7_1833
Wickerhamomyces ciferrii
BN7_1833
I
0.424
CaO19.10341
Candida albicans
CaO19.10341
I
0.424
CD36_27640
Candida dubliniensis
CD36_27640
I
0.424
CTRG_00834
Candida tropicalis
CTRG_00834
I
0.424
G210_0578
Candida maltosa
G210_0578
I
0.424
MELLADRAFT_111305
Melampsora laricipopulina
MELLADRAFT_111305
I
0.424
PICST_67218
Scheffersomyces stipitis
PICST_67218
I
0.424
estExt_fgenesh1_pg.C_chr_3.10092
Pichia stipitis
estExt_fgenesh1_pg.C_chr_3.10092
I
0.424
EPUS_08057
Endocarpon pusillum
EPUS_08057
I
0.423
AACERI_AaceriADL331C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL331C
I
0.422
AGOS_ADL331C
Ashbya gossypii
AGOS_ADL331C
I
0.422
Ecym_3473
Eremothecium cymbalariae
Ecym_3473
I
0.422
HMPREF1120_05727
Exophiala dermatitidis
HMPREF1120_05727
I
0.422
SAKL0B07656g
Lachancea kluyveri
SAKL0B07656g
I
0.422
PGTG_06975
Puccinia graminis
PGTG_06975
I
0.421
BBA_05443
Beauveria bassiana
BBA_05443
I
0.420
ANIA_01962
Aspergillus nidulans
CADANIAG00008622
I
0.420
CCM_04586
Cordyceps militaris
CCM_04586
I
0.420
COCC4DRAFT_168040
Bipolaris maydis
COCC4DRAFT_168040
I
0.420
COCCADRAFT_38231
Bipolaris zeicola
COCCADRAFT_38231
I
0.420
COCMIDRAFT_87821
Bipolaris oryzae
COCMIDRAFT_87821
I
0.420
COCVIDRAFT_34603
Bipolaris victoriae
COCVIDRAFT_34603
I
0.420
PMAA_040750
Talaromyces marneffei
PMAA_040750
I
0.420
S40285_03081
Stachybotrys chlorohalonata
S40285_03081
I
0.420
S40288_01674
Stachybotrys chartarum
S40288_01674
I
0.420
UV8b_664
Ustilaginoidea virens
UV8b_664
I
0.420
VHEMI05549
Torrubiella hemipterigena
VHEMI05549
I
0.420
AB07238.1
Alternaria brassicicola
AB07238.1
I
0.420
PMAA_040750
Penicillium marneffei
PMAA_040750
I
0.420
A1O1_07971
Capronia coronata
A1O1_07971
I
0.418
M413DRAFT_289523
Hebeloma cylindrosporum
M413DRAFT_289523
I
0.418
NCAS_0E02010
Naumovozyma castellii
NCAS_0E02010
I
0.417
V565_068660
Rhizoctonia solani
V565_068660
I
0.417
PredSwiss_CON647.2
Pneumocystis carinii
PredSwiss_CON647.2
I
0.417
Scas_Contig614.4
Saccharomyces castellii
Scas_Contig614.4
I
0.417
AFUN003674
Anopheles funestus
AFUN003674
I
0.417
BN946_scf184829.g43
Trametes cinnabarina
BN946_scf184829.g43
I
0.416
K443DRAFT_4774
Laccaria amethystina
K443DRAFT_4774
I
0.416
LACBIDRAFT_300898
Laccaria bicolor
LACBIDRAFT_300898
I
0.416
PHACADRAFT_188459
Phanerochaete carnosa
PHACADRAFT_188459
I
0.416
PLEOSDRAFT_12123
Pleurotus ostreatus
PLEOSDRAFT_12123
I
0.416
KGM_14720
Danaus plexippus
KGM_14720
I
0.415
Moror_2734
Moniliophthora roreri
Moror_2734
I
0.415
genemark-nMf.1.1.scaf07188-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf07188-processed-gene-0.1
I
0.415
MhA1_Contig651.frz3.gene5
Meloidogyne hapla
MhA1_Contig651.frz3.gene5
I
0.415