Z519_03613 (Cladophialophora bantiana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Z519_03613 T333374_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.609 0.522
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.494 0.348
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.494 0.348
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.484 0.319
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.484 0.319
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIW95032 Sox 183 251

Links

Other Sox family TFs
Other Cladophialophora bantiana TFs

291 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N
ETC3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002892 N
ETC1 Arabidopsis thaliana AT1G01380 N
ETC3 Arabidopsis thaliana AT4G01060 N
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N
Bostr.7365s0058 Boechera stricta Bostr.7365s0058 N
Bo3g054440 Brassica oleracea Bo3g054440 N
Bo9g003750 Brassica oleracea Bo9g003750 N
Bo2g098940 Brassica oleracea Bo2g098940 N
Bra000941 Brassica rapa Bra000941 N
Bra008539 Brassica rapa Bra008539 N
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N
Cagra.1372s0017 Capsella grandiflora Cagra.1372s0017 N
Carubv10011382m.g Capsella rubella Carubv10011382m.g N
Carubv10003403m.g Capsella rubella Carubv10003403m.g N
evm.TU.supercontig_3.55 Carica papaya evm.TU.supercontig_3.55 N
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N
Thhalv10009233m.g Eutrema salsugineum Thhalv10009233m.g N
Thhalv10029104m.g Eutrema salsugineum Thhalv10029104m.g N
MLOC_68772 Hordeum vulgare MLOC_68772 N
LPERR01G19720 Leersia perrieri LPERR01G19720 N
LPERR01G19750 Leersia perrieri LPERR01G19750 N
OBART01G22950 Oryza barthii OBART01G22950 N
OBART01G22980 Oryza barthii OBART01G22980 N
ORGLA01G0184700 Oryza glaberrima ORGLA01G0184700 N
OGLUM01G26700 Oryza glumaepatula OGLUM01G26700 N
OGLUM01G26760 Oryza glumaepatula OGLUM01G26760 N
BGIOSGA001192 Oryza indica BGIOSGA001192 N
BGIOSGA001193 Oryza indica BGIOSGA001193 N
OLONG_010128 Oryza longistaminata OLONG_010128 N
OPUNC01G23150 Oryza punctata OPUNC01G23150 N
ORUFI01G25800 Oryza rufipogon ORUFI01G25800 N
ORUFI01G25760 Oryza rufipogon ORUFI01G25760 N
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N
Pavir.J30777 Panicum virgatum Pavir.J30777 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
POPTR_0014s09200 Populus trichocarpa POPTR_0014s09200 N
30169.m006531 Ricinus communis 30169.m006531 N
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N
Sb03g028170 Sorghum bicolor Sb03g028170 N
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N
TRIUR3_10842 Triticum urartu TRIUR3_10842 N
GRMZM2G057955 Zea mays GRMZM2G057955 N