Aan_R011791 (Calypte anna)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Aan_R011791 T333526_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.555 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R011791 Sox 104 172

Links

Other Sox family TFs
Other Calypte anna TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA012253 Oryza indica BGIOSGA012253 N
BRADI1G67740 Brachypodium distachyon BRADI1G67740 N
F775_07027 Aegilops tauschii F775_07027 N
GRMZM2G001663 Zea mays GRMZM2G001663 N
MLOC_51314 Hordeum vulgare MLOC_51314 N
OB03G21220 Oryza brachyantha OB03G21220 N
OGLUM03G10940 Oryza glumaepatula OGLUM03G10940 N
OLONG_007342 Oryza longistaminata OLONG_007342 N
OMERI03G10300 Oryza meridionalis OMERI03G10300 N
ONIVA03G11650 Oryza nivara ONIVA03G11650 N
OPUNC03G10640 Oryza punctata OPUNC03G10640 N
ORGLA03G0105900 Oryza glaberrima ORGLA03G0105900 N
OS03G0255400 Oryza sativa OS03G0255400 N
Pavir.Ia03883 Panicum virgatum Pavir.Ia03883 N
Sb01g040730 Sorghum bicolor Sb01g040730 N
Si034492m.g Setaria italica Si034492m.g N
Traes_4AS_636DF8B4C Triticum aestivum Traes_4AS_636DF8B4C N
Traes_4DL_879C8557D Triticum aestivum Traes_4DL_879C8557D N
TRIUR3_23242 Triticum urartu TRIUR3_23242 N