CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Brh_R011859
(
Buceros rhinoceros
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Brh_R011859
T333585_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.555
0.667
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Brh_R011859
Sox
104
172
PKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQ
Links
Other
Sox
family TFs
Other
Buceros rhinoceros
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
STAT2
Homo sapiens
ENSG00000170581
D
Stat2
Mus musculus
ENSMUSG00000040033
D
STAT2
Macaca mulatta
ENSMMUG00000000803
I
Myotis_brandtii_STAT2_10009187
Myotis brandtii
Myotis_brandtii_STAT2_10009187
I
ENSP00000315768
Macaca fascicularis
ENSP00000315768
I
ENSBTAP00000005749-D1
Bos grunniens
ENSBTAP00000005749-D1
I
ENSSTOG00000015985
Ictidomys tridecemlineatus
ENSSTOG00000015985
I
Stat2
Rattus norvegicus
ENSRNOG00000031081
I
STAT2
Pteropus vampyrus
ENSPVAG00000007596
I
STAT2
Pan troglodytes
ENSPTRG00000005095
I
STAT2
Procavia capensis
ENSPCAG00000007855
I
ENSPANG00000012539
Papio anubis
ENSPANG00000012539
I
STAT2
Otolemur garnettii
ENSOGAG00000001538
I
ENSOARG00000009154
Ovis aries
ENSOARG00000009154
I
ENSNLEG00000017494
Nomascus leucogenys
ENSNLEG00000017494
I
ENSMPUG00000001431
Mustela putorius furo
ENSMPUG00000001431
I
ENSAMEG00000003886
Ailuropoda melanoleuca
ENSAMEG00000003886
I
STAT2
Myotis lucifugus
ENSMLUG00000006785
I
STAT2
Loxodonta africana
ENSLAFG00000014890
I
STAT2
Gorilla gorilla
ENSGGOG00000006127
I
STAT2
Felis catus
ENSFCAG00000012023
I
STAT2
Echinops telfairi
ENSETEG00000012048
I
STAT2
Equus caballus
ENSECAG00000022326
I
Stat2
Dipodomys ordii
ENSDORG00000012958
I
STAT2
Dasypus novemcinctus
ENSDNOG00000011002
I
ENSCSAG00000005161
Chlorocebus sabaeus
ENSCSAG00000005161
I
STAT2
Cavia porcellus
ENSCPOG00000014930
I
ENSCJAG00000011101
Callithrix jacchus
ENSCJAG00000011101
I
ENSCAFG00000017707
Canis familiaris
ENSCAFG00000017707
I
STAT2
Bos taurus
ENSBTAG00000004380
I