CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10009600
(
Chelonia mydas
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Cmyd_10009600
T333660_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10009600
Sox
109
164
GERRKRSRRGSSGRRSRAARTRSQSWKALSASDKRPFVEEAERLRIQHLQDHPNYK
Links
Other
Sox
family TFs
Other
Chelonia mydas
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.A01182
Eucalyptus grandis
Eucgr.A01182
N
GRMZM2G076602
Zea mays
GRMZM2G076602
N
LjSGA_043732.1
Lotus japonicus
LjSGA_043732.1
N
MDP0000204900
Malus domestica
MDP0000204900
N
MLOC_43041
Hordeum vulgare
MLOC_43041
I
MLOC_43575
Hordeum vulgare
MLOC_43575
I
MLOC_43830
Hordeum vulgare
MLOC_43830
N
MLOC_77763
Hordeum vulgare
MLOC_77763
N
OB05G11530
Oryza brachyantha
OB05G11530
N
OB07G16010
Oryza brachyantha
OB07G16010
N
Pavir.Gb00344
Panicum virgatum
Pavir.Gb00344
N
PDK_20s1337001g001
Phoenix dactylifera
PDK_20s1337001g001
N
PDK_20s1709981g002
Phoenix dactylifera
PDK_20s1709981g002
N
PGSC0003DMG400006482
Solanum tuberosum
PGSC0003DMG400006482
I
PGSC0003DMG400006604
Solanum tuberosum
PGSC0003DMG400006604
N
PRUPE_ppa021782mg
Prunus persica
PRUPE_ppa021782mg
N
Traes_2AL_5BA7E2623
Triticum aestivum
Traes_2AL_5BA7E2623
N
Traes_5BL_5117B3E2A
Triticum aestivum
Traes_5BL_5117B3E2A
N
Traes_5DL_E88449625
Triticum aestivum
Traes_5DL_E88449625
N
TRIUR3_24919
Triticum urartu
TRIUR3_24919
N