CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10015367
(
Chelonia mydas
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Cmyd_10015367
T333669_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10015367
Sox
38
104
RKRPLSAFFLFMAAHRSALKRSNPGWTMVEIAKKLGTMWHQQPDKDKEKYKQQAAQLRQKKRKGKAG
Links
Other
Sox
family TFs
Other
Chelonia mydas
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.451
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.451
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.451
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.451
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.451
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.439
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.439
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.439
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.439
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.439
ENSOGAG00000034481
Otolemur garnettii
ENSOGAG00000034481
N
0.434
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.431
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.429
OCS_01486
Ophiocordyceps sinensis
OCS_01486
I
0.426
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.424
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.424
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.424
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.424
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.424
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.424
X797_001988
Metarhizium robertsii
X797_001988
I
0.424
ENSMMUP00000037751
Macaca fascicularis
ENSMMUP00000037751
N
0.424
ENSCJAG00000005187
Callithrix jacchus
ENSCJAG00000005187
I
0.423
GGTG_01518
Gaeumannomyces graminis
GGTG_01518
I
0.419
MAPG_06737
Magnaporthe poae
MAPG_06737
I
0.419
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.417
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.417
evm.TU.supercontig_247.1
Carica papaya
evm.TU.supercontig_247.1
N
0.417