CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_TFAM_10031378
(
Myotis brandtii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Myotis_brandtii_TFAM_10031378
T333808_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_TFAM_10031378
Sox
5
43
RLKSIHESWKNLSSAEKQVYIQLAEDDKARYYSEIKSWE
Links
Other
Sox
family TFs
Other
Myotis brandtii
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29711.m000322
Ricinus communis
29711.m000322
I
29830.m001386
Ricinus communis
29830.m001386
I
AMTR_s00041p00193340
Amborella trichopoda
AMTR_s00041p00193340
I
AMTR_s00070p00188780
Amborella trichopoda
AMTR_s00070p00188780
I
bHLH11
Vitis vinifera
VIT_04s0023g03430
I
bHLH121
Vitis vinifera
VIT_03s0038g01790
I
bHLH121
Arabidopsis lyrata
fgenesh2_kg.3__2204__AT3G19860.1
I
BHLH121
Arabidopsis thaliana
AT3G19860
I
Bo1g112310
Brassica oleracea
Bo1g112310
I
Bostr.19424s0675
Boechera stricta
Bostr.19424s0675
I
Bra038236
Brassica rapa
Bra038236
I
BRADI3G11520
Brachypodium distachyon
BRADI3G11520
I
Cagra.0316s0082
Capsella grandiflora
Cagra.0316s0082
I
cassava24935.valid.m1
Manihot esculenta
cassava24935.valid.m1
I
cassava24936.valid.m1
Manihot esculenta
cassava24936.valid.m1
I
Ciclev10028783m.g
Citrus clementina
Ciclev10028783m.g
I
Cla014511
Citrullus lanatus
Cla014511
I
Cucsa.043580
Cucumis sativus
Cucsa.043580
I
Cucsa.169240
Cucumis sativus
Cucsa.169240
I
Eucgr.G01757
Eucalyptus grandis
Eucgr.G01757
I
Eucgr.I02346
Eucalyptus grandis
Eucgr.I02346
I
evm.TU.supercontig_6.255
Carica papaya
evm.TU.supercontig_6.255
I
gene14608-v1.0-hybrid
Fragaria vesca
gene14608-v1.0-hybrid
I
GLYMA08G15740
Glycine max
GLYMA08G15740
I
Gorai.005G252200
Gossypium raimondii
Gorai.005G252200
I
GRMZM2G114444
Zea mays
GRMZM2G114444
I
GSMUA_Achr11G16630_001
Musa acuminata
GSMUA_Achr11G16630_001
I
LPERR02G12290
Leersia perrieri
LPERR02G12290
I
Lus10028456.g
Linum usitatissimum
Lus10028456.g
I
Lus10041908.g
Linum usitatissimum
Lus10041908.g
I
MDP0000275844
Malus domestica
MDP0000275844
I
OB0197G10010
Oryza brachyantha
OB0197G10010
I
orange1.1g022288m.g
Citrus sinensis
orange1.1g022288m.g
I
Pavir.Aa02015
Panicum virgatum
Pavir.Aa02015
I
Pavir.Ab01730
Panicum virgatum
Pavir.Ab01730
I
PK18401.1
Cannabis sativa
PK18401.1
D
Pm021043
Prunus mume
Pm021043
I
Pm026758
Prunus mume
Pm026758
I
POPTR_0004s17540
Populus trichocarpa
POPTR_0004s17540
I
POPTR_0005s11550
Populus trichocarpa
POPTR_0005s11550
I
PRUPE_ppa008347mg
Prunus persica
PRUPE_ppa008347mg
I
PRUPE_ppa008596mg
Prunus persica
PRUPE_ppa008596mg
I
SapurV1A.1150s0140
Salix purpurea
SapurV1A.1150s0140
I
Sb03g028030
Sorghum bicolor
Sb03g028030
I
Si017804m.g
Setaria italica
Si017804m.g
I
TCM_000204
Theobroma cacao
TCM_000204
I
TCM_006692
Theobroma cacao
TCM_006692
I
Thhalv10021271m.g
Eutrema salsugineum
Thhalv10021271m.g
I